RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SYCE1Q8N0S2 351 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 DCAF4L2Q8NA75 395 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 CHP1Q99653 195 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 FEM1AQ9BSK4 669 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 GRPEL1Q9HAV7 217 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 FBRSL1Q9HCM7 1045 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 TMEM248Q9NWD8 314 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 DDX56Q9NY93 547 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 BCCIPQ9P287 314 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 NENFQ9UMX5 172 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 PCDHA13Q9Y5I0 950 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 MYOFQ9NZM1 2061 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ARHGAP42A6NI28 874 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 EEF2KO00418 725 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 AXIN1O15169 862 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ALOX15BO15296 676 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 KRT86O43790 486 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 LRCH4O75427 683 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 RHOBTB1O94844 696 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 LRIG2O94898 1065 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 SP9P0CG40 484 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ACADMP11310 421 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ZFXP17010 805 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 CSKP41240 450 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 NDST2P52849 883 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 SEC13P55735 322 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 LMAN2Q12907 356 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 KRT81Q14533 505 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 POLD3Q15054 466 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ELF2Q15723 593 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 DPYSL2Q16555 572 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 TTC31Q49AM3 519 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PITRM1Q5JRX3 1037 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ZFYVE27Q5T4F4 411 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 OTUD1Q5VV17 481 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PHLDB2Q86SQ0 1253 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ADIPOR2Q86V24 386 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 BBS5Q8N3I7 341 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ALLCQ8N6M5 410 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 GPR161Q8N6U8 529 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 ZBTB44Q8NCP5 570 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 OLIG1Q8TAK6 271 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 SLC35G2Q8TBE7 412 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 NSMCE1Q8WV22 266 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 NELL1Q92832 810 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 LOXL4Q96JB6 756 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PRICKLE1Q96MT3 831 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 CEP44Q9C0F1 390 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PCED1AQ9H1Q7 454 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 STON1Q9Y6Q2 735 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 CACNA1IQ9P0X4 2223 aa10.54□□□□□ -0.72
TRAFD1-208ENST00000552890 PRRT4C9JH25 899 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 SPOPO43791 374 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 CREB3O43889 395 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 EPHX1P07099 455 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 TFE3P19532 575 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 MX2P20592 715 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 NFKBIAP25963 317 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 NBL1P41271 181 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 NAP1L1P55209 391 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 GNA12Q03113 381 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 RAD51Q06609 339 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ELAVL3Q14576 367 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF234Q14588 700 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 GRM3Q14832 879 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 GEN1Q17RS7 908 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 HNRNPA1L2Q32P51 320 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 MANEALQ5VSG8 457 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 IL31Q6EBC2 164 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 TRNP1Q6NT89 227 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 Q6ZS52 159 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 RABEPKQ7Z6M1 372 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 KBTBD6Q86V97 674 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ZSCAN30Q86W11 494 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 RHOT1Q8IXI2 618 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 UMODL1-AS1Q8N2C9 162 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 KCTD6Q8NC69 237 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 IGSF8Q969P0 613 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ISG20Q96AZ6 181 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 LRIG1Q96JA1 1093 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF830Q96NB3 372 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF670Q9BS34 389 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 MAK16Q9BXY0 300 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 TMEM245Q9H330 911 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 PCSK1NQ9UHG2 260 aa10.53□□□□□ -0.72
TRAFD1-208ENST00000552890 XPO7Q9UIA9 1087 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms