RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GPR155Q7Z3F1 870 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 IQCHQ86VS3 1027 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 CACTIN-AS1Q8N1I8 211 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 CFAP52Q8N1V2 620 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 STK40Q8N2I9 435 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 UBR7Q8N806 425 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 HSFY1Q96LI6 401 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 TRIM62Q9BVG3 475 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 NUCKS1Q9H1E3 243 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 TJP2Q9UDY2 1190 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 SLCO3A1Q9UIG8 710 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 CLCA2Q9UQC9 943 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 PCDHB4Q9Y5E5 795 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 RAI2Q9Y5P3 530 aa14.67□□□□□ -0.06
CHMP1A-210ENST00000551981 SLC7A4O43246 635 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 SART1O43290 800 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 BRINP1O60477 761 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 MOCS2O96007 188 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 APOEP02649 317 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 MZF1P28698 734 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 KRT85P78386 507 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 SULT2A1Q06520 285 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 BNIP3Q12983 259 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 SLC12A1Q13621 1099 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 CNGA2Q16280 664 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 HS1BP3Q53T59 392 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 DSG4Q86SJ6 1040 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 ZNF605Q86T29 641 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 SMYD4Q8IYR2 804 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 CLEC4CQ8WTT0 213 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 RFFLQ8WZ73 363 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 TFAP2BQ92481 460 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 PTPRN2Q92932 1015 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 RPL10LQ96L21 214 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 SPAG5Q96R06 1193 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 MIS12Q9H081 205 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 RMND1Q9NWS8 449 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 ARMCX3Q9UH62 379 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 DMTF1Q9Y222 760 aa14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 ARID1BQ8NFD5 2236 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-210ENST00000551981 MGAQ8IWI9 3026 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 CAPN8A6NHC0 703 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 GABBR2O75899 941 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 ACP1P24666 158 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 PPP2CBP62714 309 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 PPP2CAP67775 309 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 FKBP3Q00688 224 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 E2F1Q01094 437 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 STAT4Q14765 748 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 TBC1D25Q3MII6 688 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 FAM46CQ5VWP2 391 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 SPATS2Q86XZ4 545 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 COL26A1Q96A83 441 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 FAM149B1Q96BN6 582 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 SLC39A13Q96H72 371 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 NT5C1BQ96P26 610 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 CYTH4Q9UIA0 394 aa14.65□□□□□ -0.06
CHMP1A-210ENST00000551981 ATMQ13315 3056 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 PLA2G2AP14555 144 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 BRD2P25440 801 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 MAT2AP31153 395 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 STK19P49842 368 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 INSM1Q01101 510 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 TLE3Q04726 772 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 CCDC173Q0VFZ6 552 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 PROX2Q3B8N5 592 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 SETMARQ53H47 684 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 KANSL1Q7Z3B3 1105 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 CHSY1Q86X52 802 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 APCDD1Q8J025 514 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 OR8D1Q8WZ84 308 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 SLC35C1Q96A29 364 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 PPP1R9BQ96SB3 815 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 NAALADL1Q9UQQ1 740 aa14.64□□□□□ -0.07
CHMP1A-210ENST00000551981 A0A1W2PQ27 194 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 A0A1W2PQ64 194 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 F5H5T6 163 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 PRAMEF26H0Y7S4 382 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 PLRG1O43660 514 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 RTN2O75298 545 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF202O95125 648 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 FYNP06241 537 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 TACR2P21452 398 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 DRD3P35462 400 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 OXCT1P55809 520 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 CXADRP78310 365 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 DAB2P98082 770 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 CETN1Q12798 172 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 ZNF211Q13398 564 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 TTC39BQ5VTQ0 682 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 RAP1GAP2Q684P5 730 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 BEND5Q7L4P6 421 aa14.63□□□□□ -0.07
CHMP1A-210ENST00000551981 TAC4Q86UU9 113 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms