RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CSH1P0DML2 217 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 CSH2P0DML3 217 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 PPIGQ13427 754 aaKnown RBP eCLIP20.17■□□□□ 0.821e-7■■■■■ 29.8
SSH1-209ENST00000551165 RFWD3Q6PCD5 774 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 TMEM150AQ86TG1 271 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 C7orf61Q8IZ16 206 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 ATPAF2Q8N5M1 289 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 MYRFLQ96LU7 910 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 MLPHQ9BV36 600 aaPredicted RBP20.17■□□□□ 0.82
SSH1-209ENST00000551165 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 PLXNA4Q9HCM2 1894 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 HTR7P34969 479 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 MMP13P45452 471 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 HECTD3Q5T447 861 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 CFAP52Q8N1V2 620 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 TEKT5Q96M29 485 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ZYG11BQ9C0D3 744 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 NACA2Q9H009 215 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 BRD8Q9H0E9 1235 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ZNF334Q9HCZ1 680 aaPredicted RBP20.16■□□□□ 0.82
SSH1-209ENST00000551165 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ZC3H7BQ9UGR2 993 aaKnown RBP20.16■□□□□ 0.82
SSH1-209ENST00000551165 RSPH14Q9UHP6 348 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 INSL5Q9Y5Q6 135 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 MAD1L1Q9Y6D9 718 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 IGLV3-10A0A075B6K4 115 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 IVLP07476 585 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 SLC6A4P31645 630 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 PPM1AP35813 382 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 SESN2P58004 480 aaPredicted RBP20.16■□□□□ 0.82
SSH1-209ENST00000551165 RING1Q06587 406 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 CBLBQ13191 982 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ACSS3Q9H6R3 686 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ALG13Q9NP73 1137 aaKnown RBP20.16■□□□□ 0.82
SSH1-209ENST00000551165 HSFX1Q9UBD0 423 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 ZNF212Q9UDV6 495 aa20.16■□□□□ 0.82
SSH1-209ENST00000551165 WASH4PA8MWX3 477 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 C1QAP02745 245 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 KLKB1P03952 638 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CCNB1P14635 433 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 ELF1P32519 619 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 TAF12Q16514 161 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 LRRC31Q6UY01 552 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CHSY1Q86X52 802 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 TCEAL8Q8IYN2 117 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CEP295NLQ96MC4 621 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 RPRD1AQ96P16 312 aaPredicted RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 TSGA13Q96PP4 275 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 SLC22A12Q96S37 553 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CYP2S1Q96SQ9 504 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 FRMD8Q9BZ67 464 aaPredicted RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 KIF9Q9HAQ2 790 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 TRPM5Q9NZQ8 1165 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 TRDMT1O14717 391 aaKnown RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 SCAMP3O14828 347 aaKnown RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 TGM5O43548 720 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CTSAP10619 480 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 RHOQP17081 205 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CCNCP24863 283 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 MGAT1P26572 445 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 PHBP35232 272 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 KBTBD12Q3ZCT8 623 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 UNC5AQ6ZN44 842 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 SRRM1Q8IYB3 904 aaKnown RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 LZTR1Q8N653 840 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 CLP1Q92989 425 aaKnown RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 HMCESQ96FZ2 354 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 OXNAD1Q96HP4 312 aaPredicted RBP20.15■□□□□ 0.82
SSH1-209ENST00000551165 APOL2Q9BQE5 337 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 GBA3Q9H227 469 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 TTLL3Q9Y4R7 772 aa20.15■□□□□ 0.82
SSH1-209ENST00000551165 ARHGAP42A6NI28 874 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 NRG2O14511 850 aaPredicted RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 GEMIN4P57678 1058 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 ERVFC1P60507 584 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 MPP2Q14168 576 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 FAM133BQ5BKY9 247 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 TRMT10BQ6PF06 316 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 UNC5BQ8IZJ1 945 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 ARFGAP2Q8N6H7 521 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 OR52K1Q8NGK4 314 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 SPATA22Q8NHS9 363 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 EBNA1BP2Q99848 306 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 RXFP1Q9HBX9 757 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 EIF2B3Q9NR50 452 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 SMYD2Q9NRG4 433 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 TMEM248Q9NWD8 314 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 PPARGC1AQ9UBK2 798 aaKnown RBP20.14■□□□□ 0.82
SSH1-209ENST00000551165 INSL6Q9Y581 213 aa20.14■□□□□ 0.82
SSH1-209ENST00000551165 CHD9Q3L8U1 2897 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 ANAPC1Q9H1A4 1944 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 ERICH4A6NGS2 130 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 DRGXA6NNA5 263 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 CXorf49A8MYA2 514 aaPredicted RBP20.14■□□□□ 0.81
SSH1-209ENST00000551165 J3KR12 359 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 CPP00450 1065 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 IRF1P10914 325 aa20.14■□□□□ 0.81
SSH1-209ENST00000551165 CHN1P15882 459 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms