RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 AGPAT1Q99943 283 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 DDX50Q9BQ39 737 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 ZDHHC5Q9C0B5 715 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 GAREM1Q9H706 876 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 PRSS16Q9NQE7 514 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 FNDC3AQ9Y2H6 1198 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 NEUROG3Q9Y4Z2 214 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CEP83Q9Y592 693 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 USP24Q9UPU5 2620 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 A0A1B0GVT2 93 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 E5RJQ4 531 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 SART1O43290 800 aaKnown RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 SEMA4FO95754 770 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 APOEP02649 317 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 FYNP06241 537 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 MMEP08473 750 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 PLEKP08567 350 aaPredicted RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 CSKP41240 450 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 PI4KAP42356 2102 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 SLC14A1Q13336 389 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 TRIP6Q15654 476 aaKnown RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 MPP7Q5T2T1 576 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 ZNF776Q68DI1 518 aaPredicted RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 KIAA0907Q7Z7F0 614 aaPredicted RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 TMTC1Q8IUR5 882 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 LRRC8AQ8IWT6 810 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 LGI2Q8N0V4 545 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 ZNF557Q8N988 423 aaPredicted RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 SLC30A5Q8TAD4 765 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 PCDHB18PQ96TA0 734 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 BTBD1Q9H0C5 482 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 FBRSQ9HAH7 460 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
NUP188-211ENST00000550219 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
NUP188-211ENST00000550219 SYNJ2BP-COX16A0A087WUM0 186 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 TMEM8BA6NDV4 472 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 H0Y626 953 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.191e-13■■■□□ 16.4
NUP188-211ENST00000550219 SIN3BO75182 1162 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 TRIM16O95361 564 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 LSM8O95777 96 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 FTH1P19P0C7X4 201 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 EIF4A3P38919 411 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 GPD2P43304 727 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 ACADSBP45954 432 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 CSNK1EP49674 416 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 BNC1Q01954 994 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 HNRNPDQ14103 355 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 ZNF423Q2M1K9 1284 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 HLA-BQ31612 363 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 PITRM1Q5JRX3 1037 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 TAF3Q5VWG9 929 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 SYPL2Q5VXT5 272 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 TRIM72Q6ZMU5 477 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 PASD1Q8IV76 773 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 WDTC1Q8N5D0 677 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 PNPLA1Q8N8W4 532 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 FIBINQ8TAL6 211 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 BAG1Q99933 345 aaPredicted RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 FAM204AQ9H8W3 233 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 NHEJ1Q9H9Q4 299 aaPredicted RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 TM7SF3Q9NS93 570 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 COX16Q9P0S2 106 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 TJP2Q9UDY2 1190 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 SUN2Q9UH99 717 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 CYTH4Q9UIA0 394 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 NENFQ9UMX5 172 aa13.85□□□□□ -0.19
NUP188-211ENST00000550219 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.85□□□□□ -0.19
NUP188-211ENST00000550219 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 ASLP04424 464 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 TNFAIP3P21580 790 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 CTSOP43234 321 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 RPL34P49207 117 aaKnown RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 AFF3P51826 1226 aaKnown RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 NNTQ13423 1086 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 TEAD4Q15561 434 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 ZC3H12AQ5D1E8 599 aaKnown RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 FSCBQ5H9T9 825 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 IL27RAQ6UWB1 636 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 CIR1Q86X95 450 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 KDF1Q8NAX2 398 aaPredicted RBP13.84□□□□□ -0.19
NUP188-211ENST00000550219 CCDC112Q8NEF3 446 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 AZIN2Q96A70 460 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 BIRC7Q96CA5 298 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 MYO19Q96H55 970 aa13.84□□□□□ -0.19
NUP188-211ENST00000550219 SLC39A13Q96H72 371 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms