RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 KCTD15Q96SI1 283 aaPredicted RBP23.16■■□□□ 1.3
BRF1-216ENST00000550208 GABRG3Q99928 467 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 ZWILCHQ9H900 591 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 PLA2G4CQ9UP65 541 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 REXO2Q9Y3B8 237 aaKnown RBP23.16■■□□□ 1.3
BRF1-216ENST00000550208 OR51B4Q9Y5P0 310 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 RAD54BQ9Y620 910 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 DOCK4Q8N1I0 1966 aa23.16■■□□□ 1.3
BRF1-216ENST00000550208 TMEM110-MUSTN1A8MSY1 372 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 MTA2O94776 668 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 DLDP09622 509 aaKnown RBP23.15■■□□□ 1.3
BRF1-216ENST00000550208 SSR1P43307 286 aaKnown RBP23.15■■□□□ 1.3
BRF1-216ENST00000550208 PXNP49023 591 aaPredicted RBP23.15■■□□□ 1.3
BRF1-216ENST00000550208 PTPN5P54829 565 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 TCEAL1Q15170 157 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 KCNT1Q5JUK3 1230 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 HEATR6Q6AI08 1181 aaKnown RBP23.15■■□□□ 1.3
BRF1-216ENST00000550208 SETD3Q86TU7 594 aaPredicted RBP23.15■■□□□ 1.3
BRF1-216ENST00000550208 NLRP14Q86W24 1093 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 NDFIP2Q9NV92 336 aa23.15■■□□□ 1.3
BRF1-216ENST00000550208 A0A0D9SEW6 157 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 A0A1W2PQF6 199 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 RCCD1A6NED2 376 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 NPC1O15118 1278 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 RARAP10276 462 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 HOXB2P14652 356 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 EPHB2P29323 1055 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 SLC25A11Q02978 314 aaKnown RBP23.14■■□□□ 1.29
BRF1-216ENST00000550208 ENPP2Q13822 863 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 SMTNL2Q2TAL5 461 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 ZNF528Q3MIS6 628 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 C6orf118Q5T5N4 469 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 KIAA1211LQ6NV74 962 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 PSTKQ8IV42 348 aaKnown RBP23.14■■□□□ 1.29
BRF1-216ENST00000550208 CAMKK1Q8N5S9 505 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 NELL1Q92832 810 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 ATOH1Q92858 354 aaPredicted RBP23.14■■□□□ 1.29
BRF1-216ENST00000550208 MRGPRX3Q96LB0 322 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 PPP1R9BQ96SB3 815 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 EPAS1Q99814 870 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 TMEM248Q9NWD8 314 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 DNAI1Q9UI46 699 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 ERVW-1Q9UQF0 538 aa23.14■■□□□ 1.29
BRF1-216ENST00000550208 ASLP04424 464 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 HLA-EP13747 358 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 PRKCHP24723 683 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 HOXA6P31267 233 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 ARHGAP25P42331 645 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 NOP2P46087 812 aaKnown RBP23.13■■□□□ 1.29
BRF1-216ENST00000550208 FNTBP49356 437 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 DGKEP52429 567 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 TAS2R40P59535 323 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 ECT2LQ008S8 904 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 E2F5Q15329 346 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 FNDC3BQ53EP0 1204 aaKnown RBP23.13■■□□□ 1.29
BRF1-216ENST00000550208 TSTD1Q8NFU3 115 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 OR7D4Q8NG98 312 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 HSPH1Q92598 858 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 PSMB7Q99436 277 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 MUC3BQ9H195 1237 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 RETREG1Q9H6L5 497 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 LUC7LQ9NQ29 371 aaKnown RBP23.13■■□□□ 1.29
BRF1-216ENST00000550208 LCMT1Q9UIC8 334 aa23.13■■□□□ 1.29
BRF1-216ENST00000550208 ILVBLA1L0T0 632 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 EEF2KO00418 725 aaKnown RBP23.12■■□□□ 1.29
BRF1-216ENST00000550208 APBB3O95704 486 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 TPI1P60174 286 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 HADHQ16836 314 aaKnown RBP23.12■■□□□ 1.29
BRF1-216ENST00000550208 ATP13A4Q4VNC1 1196 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 PPP6R3Q5H9R7 873 aaPredicted RBP23.12■■□□□ 1.29
BRF1-216ENST00000550208 SERPINA13PQ6UXR4 307 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 ZNF366Q8N895 744 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 MYO19Q96H55 970 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 RPL10LQ96L21 214 aaKnown RBP23.12■■□□□ 1.29
BRF1-216ENST00000550208 SPON2Q9BUD6 331 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 IRF2BPLQ9H1B7 796 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 TMEM245Q9H330 911 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 CD248Q9HCU0 757 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 POLMQ9NP87 494 aaPredicted RBP23.12■■□□□ 1.29
BRF1-216ENST00000550208 ZSCAN32Q9NX65 697 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 SLCO3A1Q9UIG8 710 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 VPS28Q9UK41 221 aa23.12■■□□□ 1.29
BRF1-216ENST00000550208 IPO7O95373 1038 aaKnown RBP23.11■■□□□ 1.29
BRF1-216ENST00000550208 GOT1P17174 413 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 MAN1A1P33908 653 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 MAPKAPK2P49137 400 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 MRE11P49959 708 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 NRLP54845 237 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 RTL3Q8N8U3 475 aaKnown RBP23.11■■□□□ 1.29
BRF1-216ENST00000550208 TEKT4Q8WW24 435 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 FAM126AQ9BYI3 521 aaPredicted RBP23.11■■□□□ 1.29
BRF1-216ENST00000550208 MTG2Q9H4K7 406 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 CATSPERBQ9H7T0 1116 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 FAM86C1Q9NVL1 165 aa23.11■■□□□ 1.29
BRF1-216ENST00000550208 CWC15Q9P013 229 aaKnown RBP23.11■■□□□ 1.29
BRF1-216ENST00000550208 TCRBV21S2A2A0A5A6 115 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 WASH4PA8MWX3 477 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 SNAP91O60641 907 aa23.1■■□□□ 1.29
BRF1-216ENST00000550208 EPHX1P07099 455 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms