RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 RAD51CO43502 376 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 TBL1XO60907 577 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 STK10O94804 968 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 LUC7L3O95232 432 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 FCARP24071 287 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 GARSP41250 739 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 VIPR2P41587 438 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 PTGIRP43119 386 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 KCNJ1P48048 391 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 IRAK1P51617 712 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 PPIDQ08752 370 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 PRKD1Q15139 912 aaPredicted RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 HEATR6Q6AI08 1181 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 TIGD7Q6NT04 549 aaPredicted RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 C4orf22Q6V702 233 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 JAMLQ86YT9 394 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 ARHGAP12Q8IWW6 846 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 CFAP52Q8N1V2 620 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 ATPAF2Q8N5M1 289 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 CCDC89Q8N998 374 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 RIN3Q8TB24 985 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 DEPDC1BQ8WUY9 529 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 IRF7Q92985 503 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 FATE1Q969F0 183 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 MYEOVQ96EZ4 313 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 GUCD1Q96NT3 240 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 FAM118BQ9BPY3 351 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 LRRC1Q9BTT6 524 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 SPHK2Q9NRA0 654 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 DUS2Q9NX74 493 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 UTP11Q9Y3A2 253 aaKnown RBP17.84■□□□□ 0.45
LETMD1-220ENST00000549686 C2orf16Q68DN1 1984 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 RASA4BC9J798 803 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 H0Y626 953 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 SGK1O00141 431 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 TRDMT1O14717 391 aaKnown RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 NDC80O14777 642 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 CTIFO43310 598 aaKnown RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 RASA4O43374 803 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 ECI2O75521 394 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 NFATC1O95644 943 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 ADH1CP00326 375 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 PENKP01210 267 aaPredicted RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 RHOCP08134 193 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 KCNA5P22460 613 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 CCNCP24863 283 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 ACTN2P35609 894 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 CDH18Q13634 790 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 POLD3Q15054 466 aaPredicted RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 PPP1R7Q15435 360 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 SKIV2LQ15477 1246 aaKnown RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 Q7L0L9 218 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 CIR1Q86X95 450 aaPredicted RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 MFSD6LQ8IWD5 586 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 GPR161Q8N6U8 529 aaKnown RBP17.83■□□□□ 0.44
LETMD1-220ENST00000549686 CCNYQ8ND76 341 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 HLA-CQ95604 372 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 RTP4Q96DX8 246 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 TMEM121Q9BTD3 319 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 SLC39A8Q9C0K1 460 aa17.83■□□□□ 0.44
LETMD1-220ENST00000549686 DOCK6Q96HP0 2047 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 HELZP42694 1942 aaKnown RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 H3BQ06 376 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 DFFAO00273 331 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 SCAMP3O14828 347 aaKnown RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 TTI1O43156 1089 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 MCM3P25205 808 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 SGSHP51688 502 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 GNA12Q03113 381 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 FCHO2Q0JRZ9 810 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 AP1B1Q10567 949 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 SLC12A1Q13621 1099 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 PTK6Q13882 451 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 P3H1Q32P28 736 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 FYB2Q5VWT5 728 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 MFN1Q8IWA4 741 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 YAF2Q8IY57 180 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 CCDC13Q8IYE1 715 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 ADGRG2Q8IZP9 1017 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 HTR3CQ8WXA8 447 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 ATP2A3Q93084 1043 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 RSPRY1Q96DX4 576 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 CELF6Q96J87 481 aaKnown RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 VAT1Q99536 393 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 ERP44Q9BS26 406 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 SLC2A11Q9BYW1 496 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 NOL6Q9H6R4 1146 aaKnown RBP17.82■□□□□ 0.44
LETMD1-220ENST00000549686 PCDH9Q9HC56 1237 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 NDFIP2Q9NV92 336 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 WNT6Q9Y6F9 365 aa17.82■□□□□ 0.44
LETMD1-220ENST00000549686 KCNN4O15554 427 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 MBTPS2O43462 519 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 MAP3K6O95382 1288 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 PSMC3P17980 439 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 HOXD9P28356 352 aaPredicted RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 RBL1P28749 1068 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 PAPOLAP51003 745 aaKnown RBP17.81■□□□□ 0.44
LETMD1-220ENST00000549686 GAD2Q05329 585 aa17.81■□□□□ 0.44
LETMD1-220ENST00000549686 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms