RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 AADACL2Q6P093 401 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 ZNF852Q6ZMS4 543 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 SETD3Q86TU7 594 aaPredicted RBP21.76■■□□□ 1.07
VPS29-206ENST00000549578 NPWQ8N729 165 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 ZNF557Q8N988 423 aaPredicted RBP21.76■■□□□ 1.07
VPS29-206ENST00000549578 TERB1Q8NA31 727 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 NETO2Q8NC67 525 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 RNF157Q96PX1 679 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 KIAA1522Q9P206 1035 aaPredicted RBP21.76■■□□□ 1.07
VPS29-206ENST00000549578 SLC27A6Q9Y2P4 619 aa21.76■■□□□ 1.07
VPS29-206ENST00000549578 MAN2B1O00754 1011 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 KRT10P13645 584 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 MSNP26038 577 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 SIGLEC14Q08ET2 396 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 TAZQ16635 292 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 TMEM196Q5HYL7 178 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 RNF219Q5W0B1 726 aaPredicted RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 FSTL4Q6MZW2 842 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 C1orf228Q6PIY5 440 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 TMCO3Q6UWJ1 677 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 VSIG1Q86XK7 387 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 PQLC3Q8N755 202 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.75■■□□□ 1.07
VPS29-206ENST00000549578 PSMB7Q99436 277 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 RETREG1Q9H6L5 497 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 NOL6Q9H6R4 1146 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 INTS6Q9UL03 887 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 NDRG2Q9UN36 371 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 JRKLQ9Y4A0 524 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 A0A0D9SEW6 157 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 ZNF487B1APH4 448 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 APODP05090 189 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 GRIA2P42262 883 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 STARD6P59095 220 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 FUT11Q495W5 492 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 TFDP3Q5H9I0 405 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 KAZNQ674X7 775 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 RFX6Q8HWS3 928 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 APCDD1Q8J025 514 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 OR7D4Q8NG98 312 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 EZH1Q92800 747 aaPredicted RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 SHDQ96IW2 340 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 CELF6Q96J87 481 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 WDR24Q96S15 920 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 MAK16Q9BXY0 300 aaKnown RBP21.75■■□□□ 1.07
VPS29-206ENST00000549578 KLC2Q9H0B6 622 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 MUC3BQ9H195 1237 aa21.75■■□□□ 1.07
VPS29-206ENST00000549578 hCG_1818297A0A087WSY0 165 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 ILVBLA1L0T0 632 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 TBC1D3BA6NDS4 549 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 PRRT4C9JH25 899 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 RAMP2O60895 175 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 EGFP01133 1207 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 GNA12Q03113 381 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 GRSF1Q12849 480 aaKnown RBP eCLIP21.74■■□□□ 1.07
VPS29-206ENST00000549578 TMEM215Q68D42 235 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 NCBP2-AS2Q69YL0 99 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 KIAA0907Q7Z7F0 614 aaPredicted RBP21.74■■□□□ 1.07
VPS29-206ENST00000549578 UMODL1-AS1Q8N2C9 162 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.74■■□□□ 1.07
VPS29-206ENST00000549578 UBE2Q2Q8WVN8 375 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 EXOC4Q96A65 974 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 HERPUD2Q9BSE4 406 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 FEM1AQ9BSK4 669 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 FOXQ1Q9C009 403 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 TBC1D17Q9HA65 648 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 OR51B4Q9Y5P0 310 aa21.74■■□□□ 1.07
VPS29-206ENST00000549578 KANSL1LA0AUZ9 987 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 ANTXRLA6NF34 631 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 KCNK3O14649 394 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 ATP1A1P05023 1023 aaKnown RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 ALADP13716 330 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 TARSP26639 723 aaKnown RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 DEKP35659 375 aaKnown RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 ACVRL1P37023 503 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 OXCT1P55809 520 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 DYNLT1P63172 113 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 ADCY2Q08462 1091 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 PLEKHG6Q3KR16 790 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 PREPLQ4J6C6 727 aaPredicted RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 PITRM1Q5JRX3 1037 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 TRIM67Q6ZTA4 783 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 ADIPOR2Q86V24 386 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 SUGP1Q8IWZ8 645 aaKnown RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 TP53INP2Q8IXH6 220 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 AHI1Q8N157 1196 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 ALG14Q96F25 216 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 HEMGNQ9BXL5 484 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 DONSONQ9NYP3 566 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 VPS28Q9UK41 221 aa21.73■■□□□ 1.07
VPS29-206ENST00000549578 MTF2Q9Y483 593 aaPredicted RBP21.73■■□□□ 1.07
VPS29-206ENST00000549578 TECTAO75443 2155 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 MFSD11O43934 449 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 DRD1P21728 446 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 COPS2P61201 443 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 SLC12A1Q13621 1099 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 UBXN2BQ14CS0 331 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 POLD3Q15054 466 aaPredicted RBP21.72■■□□□ 1.07
VPS29-206ENST00000549578 PPP2R5EQ16537 467 aa21.72■■□□□ 1.07
VPS29-206ENST00000549578 ZNF783Q6ZMS7 281 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms