RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 APOL2Q9BQE5 337 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TCF7L2Q9NQB0 619 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 FZD10Q9ULW2 581 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 POLR2AP24928 1970 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CNMDO75829 334 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TOMM70O94826 608 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 PABPC4LP0CB38 370 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SETSIPP0DME0 302 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 GARSP41250 739 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 PKNOX1P55347 436 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 MRPS22P82650 360 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TMEM62Q0P6H9 643 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CCDC153Q494R4 210 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 DCAF6Q58WW2 860 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 GRTP1Q5TC63 336 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZDHHC17Q8IUH5 632 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 RNF139Q8WU17 664 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 DCUN1D1Q96GG9 259 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CAMKK2Q96RR4 588 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 RTKNQ9BST9 563 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CCDC28BQ9BUN5 200 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM96AQ9H5X1 160 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 UBAP1Q9NZ09 502 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 GTF2IRD1Q9UHL9 959 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 MYOCOSA0A1B0GUC4 107 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 HACD1B0YJ81 288 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CASQ2O14958 399 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CFLARO15519 480 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 STAU1O95793 577 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SLC26A2P50443 739 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SERPINB8P50452 374 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 THOP1P52888 689 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 BST2Q10589 180 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 NME3Q13232 169 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 DYNC1I2Q13409 638 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 OGFRL1Q5TC84 451 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TMEM198Q66K66 360 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TTC39CQ8N584 583 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SLC2A14Q8TDB8 520 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 PPP1R13LQ8WUF5 828 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 USP13Q92995 863 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 KCNK16Q96T55 309 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CDRT15Q96T59 188 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 GATA5Q9BWX5 397 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 EIF2B3Q9NR50 452 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 TK2O00142 265 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 ATP9BO43861 1147 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 FBXO21O94952 628 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 PIK3R1P27986 724 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 PMLP29590 882 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 PPP2R5DQ14738 602 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 NOL9Q5SY16 702 aaKnown RBP14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 CERCAMQ5T4B2 595 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 SPATA24Q86W54 205 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 PQLC1Q8N2U9 271 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 DNAAF3Q8N9W5 541 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 RNF217Q8TC41 542 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 HAPLN3Q96S86 360 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 KLHL8Q9P2G9 620 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 STX16-NPEPL1H3BU86 382 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 LGALS2P05162 132 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 C2P06681 752 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 SMIM18P0DKX4 95 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 TPH1P17752 444 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 XRCC1P18887 633 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 GLDCP23378 1020 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 GLRBP48167 497 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 LIMK2P53671 638 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 LSAMPQ13449 338 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 NAB1Q13506 487 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 MAP3K21Q5TCX8 1036 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 OTUD1Q5VV17 481 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 ANKRD52Q8NB46 1076 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 AFG1LQ8WV93 481 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 NAT9Q9BTE0 207 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 NUF2Q9BZD4 464 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 NMRAL1Q9HBL8 299 aa14.44□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM72CH0Y354 149 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 TRIM13O60858 407 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 JUNP05412 331 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 PIM1P11309 404 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 SPRP35270 261 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 MATKP42679 507 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 MAGEA12P43365 314 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 RABGGTBP53611 331 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 SNX16P57768 344 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 XIAPP98170 497 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 ADIGQ0VDE8 80 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 LSM12Q3MHD2 195 aaKnown RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 SPANXN3Q5MJ09 141 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM72AQ5TYM5 149 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM72DQ6L9T8 149 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 SDCCAG8Q86SQ7 713 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 FAM72BQ86X60 149 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 DSELQ8IZU8 1212 aa14.43□□□□□ -0.1
RAPGEF3-218ENST00000548919 URGCPQ8TCY9 931 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms