RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TP53INP1Q96A56 240 aa13.04□□□□□ -0.32
PTCH1-212ENST00000546744 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
PTCH1-212ENST00000546744 EHD3Q9NZN3 535 aa13.04□□□□□ -0.32
PTCH1-212ENST00000546744 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
PTCH1-212ENST00000546744 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 DNAJA2O60884 412 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TSC22D2O75157 780 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CABYRO75952 493 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FARP2O94887 1054 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 UMPSP11172 480 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TAF5Q15542 800 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FUT11Q495W5 492 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 SPDYE7PQ495Y7 208 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PTRHD1Q6GMV3 140 aaKnown RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FAM126BQ8IXS8 530 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 KBTBD2Q8IY47 623 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 UBASH3BQ8TF42 649 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 HPS1Q92902 700 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CHST12Q9NRB3 414 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 RGS20O76081 388 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FBXO21O94952 628 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PIK3CGP48736 1102 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 COPZ1P61923 177 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PLA2G4FQ68DD2 849 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PROSER1Q86XN7 944 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TMEM126BQ8IUX1 230 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PGAM4Q8N0Y7 254 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 B3GALT6Q96L58 329 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 GPATCH1Q9BRR8 931 aaKnown RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 TJP2Q9UDY2 1190 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PTBP2Q9UKA9 531 aaKnown RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 GPR75-ASB3A0A0A6YYF3 556 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CCNKO75909 580 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 ATP5F1P24539 256 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 ACTR3P61158 418 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CDK18Q07002 472 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 SV2CQ496J9 727 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 HHIPL2Q6UWX4 724 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 KIAA0408Q6ZU52 694 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CBWD2Q8IUF1 395 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 CCDC36Q8IYA8 594 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 RBM15BQ8NDT2 890 aaKnown RBP13.03□□□□□ -0.32
PTCH1-212ENST00000546744 SEPHS2Q99611 448 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 ABCB10Q9NRK6 738 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 DNAJC28Q9NX36 388 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
PTCH1-212ENST00000546744 MYL12AP19105 171 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 MTA1Q13330 715 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 FAM47BQ8NA70 645 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-212ENST00000546744 Q96MT0 163 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 MBOAT7Q96N66 472 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 MMTAG2Q9BU76 263 aaKnown RBP13.02□□□□□ -0.32
PTCH1-212ENST00000546744 DGCR6LQ9BY27 220 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.32
PTCH1-212ENST00000546744 PTGES3LE9PB15 166 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 ARIH2O95376 493 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 NADKO95544 446 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-212ENST00000546744 LRRC74AQ0VAA2 488 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 CCDC157Q569K6 752 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 CDC73Q6P1J9 531 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 GADL1Q6ZQY3 521 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 MCFD2Q8NI22 146 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 HELQQ8TDG4 1101 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 MYLPFQ96A32 169 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 TEKT5Q96M29 485 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 HDHD2Q9H0R4 259 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 PRR12Q9ULL5 1215 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 AP4E1Q9UPM8 1137 aa13.02□□□□□ -0.32
PTCH1-212ENST00000546744 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 PLK4O00444 970 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 BPGMP07738 259 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 RTP1P59025 263 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 KCNMB4Q86W47 210 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 GSTCDQ8NEC7 633 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 MAGEE2Q8TD90 523 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-212ENST00000546744 DPY30Q9C005 99 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 REEP1Q9H902 201 aa13.02□□□□□ -0.33
PTCH1-212ENST00000546744 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms