RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 RAI2Q9Y5P3 530 aa17.24■□□□□ 0.35
CPSF7-225ENST00000545934 SETXQ7Z333 2677 aaKnown RBP17.24■□□□□ 0.35
CPSF7-225ENST00000545934 M0QYV0 167 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 IGLV3-25P01717 112 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 MZF1P28698 734 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-225ENST00000545934 FMO5P49326 533 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 C19orf57Q0VDD7 668 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 ELAVL3Q14576 367 aaKnown RBP17.23■□□□□ 0.35
CPSF7-225ENST00000545934 SLC45A4Q5BKX6 768 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 NAPEPLDQ6IQ20 393 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 IQCHQ86VS3 1027 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 OR14C36Q8NHC7 312 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 LMO3Q8TAP4 145 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 SLC39A7Q92504 469 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 KDM4CQ9H3R0 1056 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 ARMCX3Q9UH62 379 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-225ENST00000545934 XPO7Q9UIA9 1087 aaKnown RBP17.23■□□□□ 0.35
CPSF7-225ENST00000545934 PCDHB4Q9Y5E5 795 aa17.23■□□□□ 0.35
CPSF7-225ENST00000545934 MOCS3O95396 460 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 CALCAP01258 141 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 CKMT2P17540 419 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 ACP1P24666 158 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 BRD2P25440 801 aaKnown RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 STK19P49842 368 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 VASPP50552 380 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 PLK1P53350 603 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 METAP1P53582 386 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 SEMG2Q02383 582 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 PNOCQ13519 176 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 EIF4EBP2Q13542 120 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 SLC12A1Q13621 1099 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 PROX2Q3B8N5 592 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 ZNF658Q5TYW1 1059 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 SYPL2Q5VXT5 272 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 FRS2Q8WU20 508 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 KAT5Q92993 513 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 RPL10LQ96L21 214 aaKnown RBP17.22■□□□□ 0.35
CPSF7-225ENST00000545934 MIS12Q9H081 205 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 CYTH4Q9UIA0 394 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 AK5Q9Y6K8 562 aa17.22■□□□□ 0.35
CPSF7-225ENST00000545934 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 SLC7A4O43246 635 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 PLRG1O43660 514 aaKnown RBP17.21■□□□□ 0.35
CPSF7-225ENST00000545934 IL1BP01584 269 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 VAV1P15498 845 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 TACR2P21452 398 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 NUDT1P36639 197 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 GPD2P43304 727 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 INSM1Q01101 510 aaPredicted RBP17.21■□□□□ 0.35
CPSF7-225ENST00000545934 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 LRRC69Q6ZNQ3 347 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.35
CPSF7-225ENST00000545934 LGI2Q8N0V4 545 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 DCBLD1Q8N8Z6 715 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 NT5C1BQ96P26 610 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 TSG101Q99816 390 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
CPSF7-225ENST00000545934 RMND1Q9NWS8 449 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 DMTF1Q9Y222 760 aa17.21■□□□□ 0.35
CPSF7-225ENST00000545934 TBC1D3DA0A087WVF3 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3IA0A087WXS9 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3EA0A087X179 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3KA0A087X1G2 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3FA6NER0 549 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3LB9A6J9 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 RRP8O43159 456 aaKnown RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 BRINP1O60477 761 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 ZIC2O95409 532 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 MOCS2O96007 188 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3HP0C7X1 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 OVGP1Q12889 678 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 RNF219Q5W0B1 726 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 RAP1GAP2Q684P5 730 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3GQ6DHY5 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3CQ6IPX1 549 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TRIM69Q86WT6 500 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 TBC1D3Q8IZP1 549 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 BAP1Q92560 729 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 BTN2A3PQ96KV6 586 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 FCRL3Q96P31 734 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 SPAG5Q96R06 1193 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 SLC4A5Q9BY07 1137 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 SARDHQ9UL12 918 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 CNTN6Q9UQ52 1028 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 ATMQ13315 3056 aa17.2■□□□□ 0.34
CPSF7-225ENST00000545934 ASH1LQ9NR48 2969 aaKnown RBP17.2■□□□□ 0.34
CPSF7-225ENST00000545934 SART1O43290 800 aaKnown RBP17.19■□□□□ 0.34
CPSF7-225ENST00000545934 RTN2O75298 545 aa17.19■□□□□ 0.34
CPSF7-225ENST00000545934 GLDCP23378 1020 aa17.19■□□□□ 0.34
CPSF7-225ENST00000545934 GCNT1Q02742 428 aa17.19■□□□□ 0.34
CPSF7-225ENST00000545934 SULT2A1Q06520 285 aa17.19■□□□□ 0.34
CPSF7-225ENST00000545934 ZC3H12AQ5D1E8 599 aaKnown RBP17.19■□□□□ 0.34
CPSF7-225ENST00000545934 AGBL4Q5VU57 503 aa17.19■□□□□ 0.34
CPSF7-225ENST00000545934 CXorf57Q6NSI4 855 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms