RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 MPP7Q5T2T1 576 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 GPATCH4Q5T3I0 446 aaKnown RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 RIPPLY2Q5TAB7 128 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 FUT10Q6P4F1 479 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 CCNI2Q6ZMN8 369 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 RFX8Q6ZV50 586 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 ACAD11Q709F0 780 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TMPRSS9Q7Z410 1059 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 STRA8Q7Z7C7 330 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TAC4Q86UU9 113 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 ANKLE2Q86XL3 938 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 RIOX2Q8IUF8 465 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 SLC9A9Q8IVB4 645 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 DNAJA4Q8WW22 397 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 PRPF31Q8WWY3 499 aaKnown RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 SEC14L1Q92503 715 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 FAM122AQ96E09 287 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 NT5C1BQ96P26 610 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 CCNL2Q96S94 520 aaPredicted RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 KCNJ15Q99712 375 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TUBB6Q9BUF5 446 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 ZSCAN5AQ9BUG6 496 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 C1QTNF7Q9BXJ2 289 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TXLNGYQ9BZA5 131 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 KCNH6Q9H252 994 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 LRMDAQ9H2I8 198 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 MVB12BQ9H7P6 319 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 KLHL11Q9NVR0 708 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 TAS2R3Q9NYW6 316 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 VPS28Q9UK41 221 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 PHTF1Q9UMS5 762 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 PPP2R2CQ9Y2T4 447 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 UTP11Q9Y3A2 253 aaKnown RBP5.25□□□□□ -1.57
UBE4A-203ENST00000545354 PRELID3BQ9Y3B1 194 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 GMPPBQ9Y5P6 360 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 NRCAMQ92823 1304 aa5.25□□□□□ -1.57
UBE4A-203ENST00000545354 RAPGEF6Q8TEU7 1601 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ESYT2A0FGR8 921 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CCDC160A6NGH7 325 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 A8MXQ7 604 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ERVV-1B6SEH8 477 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 H3BNX3 289 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CCRL2O00421 344 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SLC22A2O15244 555 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 OGTO15294 1046 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 TP73O15350 636 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CLDN3O15551 220 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ADCY6O43306 1168 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 PEX11AO75192 247 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 BCAS1O75363 584 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 DDNO94850 711 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 PGM3O95394 542 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 APOA1P02647 267 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 UBTFL1P0CB47 393 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SAGP10523 405 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SERPINB1P30740 379 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 EIF4A3P38919 411 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 GCGRP47871 477 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ANXA11P50995 505 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CDH4P55283 916 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 NFKB2Q00653 900 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SPIRE1Q08AE8 756 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 TFCP2Q12800 502 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SLC14A1Q13336 389 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 NFYCQ13952 458 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SELPLGQ14242 412 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 GCKRQ14397 625 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 RRP1BQ14684 758 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 PRKD1Q15139 912 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 C21orf62-AS1Q17RA5 79 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ESCO2Q56NI9 601 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 AGAP7PQ5VUJ5 663 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ARSKQ6UWY0 536 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 TTC7BQ86TV6 843 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 TDRPQ86YL5 185 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 NELFCDQ8IXH7 590 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 GSPT2Q8IYD1 628 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 ULK2Q8IYT8 1036 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 EIF1ADQ8N9N8 165 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 RDH13Q8NBN7 331 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 OR4D10Q8NGI6 311 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SMG7Q92540 1137 aaKnown RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 PIGKQ92643 395 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 STAMQ92783 540 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 DPF2Q92785 391 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 TMEM80Q96HE8 168 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SGCZQ96LD1 299 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 INPP4AQ96PE3 977 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CSRNP1Q96S65 589 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 PKP4Q99569 1192 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 CITED2Q99967 270 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 FRMD8P1Q9BZ68 369 aaPredicted RBP5.24□□□□□ -1.57
UBE4A-203ENST00000545354 SLC19A3Q9BZV2 496 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 HOXD1Q9GZZ0 328 aa5.24□□□□□ -1.57
UBE4A-203ENST00000545354 RHBGQ9H310 441 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms