RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 PTPRZ1P23471 2315 aaPredicted RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 IGHV1OR15-9A0A0B4J2B8 117 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 MAP3K13O43283 966 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 CNTN5O94779 1100 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 MZF1P28698 734 aaPredicted RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 HNRNPH3P31942 346 aaKnown RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 VASPP50552 380 aaPredicted RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 AIF1P55008 147 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 SPEM2Q0P670 501 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 SCAPQ12770 1279 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 CSRP2Q16527 193 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 HNRNPA1L2Q32P51 320 aaKnown RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 ALFQ53S48 1182 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 ARTNQ5T4W7 220 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 LPCAT2Q7L5N7 544 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 KIAA2013Q8IYS2 634 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 ZNF366Q8N895 744 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 ALG14Q96F25 216 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 SIPA1Q96FS4 1042 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 FEM1AQ9BSK4 669 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 ZYG11BQ9C0D3 744 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 SLC6A17Q9H1V8 727 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 RETREG1Q9H6L5 497 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 SEMA4GQ9NTN9 838 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 USP36Q9P275 1121 aaKnown RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 OR12D3Q9UGF7 316 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 ADAMTS1Q9UHI8 967 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 MBD1Q9UIS9 605 aaPredicted RBP16.72■□□□□ 0.27
CIT-212ENST00000543239 SCINQ9Y6U3 715 aa16.72■□□□□ 0.27
CIT-212ENST00000543239 AP5Z1O43299 807 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 ATMINO43313 823 aaPredicted RBP16.71■□□□□ 0.27
CIT-212ENST00000543239 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 NNMTP40261 264 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 CTSOP43234 321 aaPredicted RBP16.71■□□□□ 0.27
CIT-212ENST00000543239 C6orf118Q5T5N4 469 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 MANEALQ5VSG8 457 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 DRC7Q8IY82 874 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 CCDC185Q8N715 623 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 FRMD1Q8N878 549 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 FNIP1Q8TF40 1166 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 ARRDC1-AS1Q9H2J1 176 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 PARD6AQ9NPB6 346 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 ITM2CQ9NQX7 267 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.27
CIT-212ENST00000543239 VPS28Q9UK41 221 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 USP18Q9UMW8 372 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 CYP8B1Q9UNU6 501 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 OR51B4Q9Y5P0 310 aa16.71■□□□□ 0.27
CIT-212ENST00000543239 CFAP54Q96N23 3096 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 BCLAF3A2AJT9 711 aaKnown RBP16.7■□□□□ 0.26
CIT-212ENST00000543239 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
CIT-212ENST00000543239 TMEM191CA6NGB0 347 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 IGLV3-19P01714 112 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 RHOCP08134 193 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 ACADMP11310 421 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 OR1E1P30953 314 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 MPLP40238 635 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 OGDHQ02218 1023 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 LMNB2Q03252 620 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 ZBTB16Q05516 673 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 PLA2G2CQ5R387 149 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 ZNF783Q6ZMS7 281 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 TMC6Q7Z403 805 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 TFAP2DQ7Z6R9 452 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 SLFN11Q7Z7L1 901 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 DNAJC7Q99615 494 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.7■□□□□ 0.26
CIT-212ENST00000543239 C2orf49Q9BVC5 232 aaPredicted RBP16.7■□□□□ 0.26
CIT-212ENST00000543239 MUC3BQ9H195 1237 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 MRPL47Q9HD33 250 aaKnown RBP16.7■□□□□ 0.26
CIT-212ENST00000543239 ZNF212Q9UDV6 495 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 SLC25A13Q9UJS0 675 aa16.7■□□□□ 0.26
CIT-212ENST00000543239 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 EDDM13A0A1B0GTR0 161 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 ILVBLA1L0T0 632 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
CIT-212ENST00000543239 TPM1P09493 284 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 ZNF806P0C7X5 589 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 CD6P30203 668 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 OXTRP30559 389 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 DPP6P42658 865 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 DHPSP49366 369 aaPredicted RBP16.69■□□□□ 0.26
CIT-212ENST00000543239 TPMTP51580 245 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 KRT83P78385 493 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 RPL6Q02878 288 aaKnown RBP16.69■□□□□ 0.26
CIT-212ENST00000543239 CREB5Q02930 508 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 EFHC2Q5JST6 749 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 ZNF776Q68DI1 518 aaPredicted RBP16.69■□□□□ 0.26
CIT-212ENST00000543239 SARM1Q6SZW1 724 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 CYP2U1Q7Z449 544 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 DNAAF5Q86Y56 855 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 TMEFF1Q8IYR6 380 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
CIT-212ENST00000543239 RPL10LQ96L21 214 aaKnown RBP16.69■□□□□ 0.26
CIT-212ENST00000543239 RSPH9Q9H1X1 276 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms