RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 RHOCP08134 193 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 SRPRAP08240 638 aaKnown RBP18.9■□□□□ 0.62
COPS7A-216ENST00000543170 RHOQP17081 205 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 CYLC1P35663 651 aaPredicted RBP18.9■□□□□ 0.62
COPS7A-216ENST00000543170 MAPKAPK2P49137 400 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 VASPP50552 380 aaPredicted RBP18.9■□□□□ 0.62
COPS7A-216ENST00000543170 ZNF135P52742 658 aaPredicted RBP18.9■□□□□ 0.62
COPS7A-216ENST00000543170 DMWDQ09019 674 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 STARD3Q14849 445 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 ERMARDQ5T6L9 678 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 FAM72AQ5TYM5 149 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 FAM72DQ6L9T8 149 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 SERPINA13PQ6UXR4 307 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 NLRP14Q86W24 1093 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 FAM72BQ86X60 149 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 TMTC1Q8IUR5 882 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 RHOT2Q8IXI1 618 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 APCDD1Q8J025 514 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 OR52K2Q8NGK3 314 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 PEBP4Q96S96 227 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 EPAS1Q99814 870 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 SNRNP25Q9BV90 132 aaKnown RBP18.9■□□□□ 0.62
COPS7A-216ENST00000543170 CTTNBP2NLQ9P2B4 639 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 USP18Q9UMW8 372 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 AP4E1Q9UPM8 1137 aa18.9■□□□□ 0.62
COPS7A-216ENST00000543170 NYNRINQ9P2P1 1898 aaKnown RBP18.89■□□□□ 0.61
COPS7A-216ENST00000543170 TCRBV21S2A2A0A5A6 115 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 ILVBLA1L0T0 632 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 GOLGA6L6A8MZA4 724 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 AXIN1O15169 862 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 MTA2O94776 668 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 MZF1P28698 734 aaPredicted RBP18.89■□□□□ 0.61
COPS7A-216ENST00000543170 OR1E1P30953 314 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 WASP42768 502 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 FNTBP49356 437 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 TCEAL1Q15170 157 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 FNDC3BQ53EP0 1204 aaKnown RBP18.89■□□□□ 0.61
COPS7A-216ENST00000543170 TFAP2DQ7Z6R9 452 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 DCAF4L2Q8NA75 395 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 MDGA1Q8NFP4 955 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 CYB5D2Q8WUJ1 264 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 RFFLQ8WZ73 363 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 MYO19Q96H55 970 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 MRGPRX3Q96LB0 322 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 FEM1AQ9BSK4 669 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 FBRSQ9HAH7 460 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 FAM86C1Q9NVL1 165 aa18.89■□□□□ 0.61
COPS7A-216ENST00000543170 CXorf51AA0A1B0GTR3 108 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 WASH4PA8MWX3 477 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 FGF10O15520 208 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-216ENST00000543170 C7P10643 843 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 PRKCHP24723 683 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 MAN1A1P33908 653 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 ETFBP38117 255 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 ST8SIA6P61647 398 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 ECT2LQ008S8 904 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 RNF219Q5W0B1 726 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-216ENST00000543170 ANO7Q6IWH7 933 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 KIAA1211LQ6NV74 962 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 RWDD4Q6NW29 188 aaKnown RBP18.88■□□□□ 0.61
COPS7A-216ENST00000543170 PYROXD2Q8N2H3 581 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 TEKT4Q8WW24 435 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 BTBD6Q96KE9 485 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 MUC3BQ9H195 1237 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 EPC1Q9H2F5 836 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 LUC7LQ9NQ29 371 aaKnown RBP18.88■□□□□ 0.61
COPS7A-216ENST00000543170 PCSK1NQ9UHG2 260 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 VPS28Q9UK41 221 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 ERVW-1Q9UQF0 538 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 R4GN57 208 aa18.88■□□□□ 0.61
COPS7A-216ENST00000543170 MYO15AQ9UKN7 3530 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 WASH3PC4AMC7 463 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 SYNCRIPO60506 623 aaKnown RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 PROSCO94903 275 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 EPHX1P07099 455 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 EPHB2P29323 1055 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 PLA2G5P39877 138 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 SLC25A11Q02978 314 aaKnown RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 CAMK2GQ13555 558 aaPredicted RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 BOLA3Q53S33 107 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 RTL3Q8N8U3 475 aaKnown RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 C2orf49Q9BVC5 232 aaPredicted RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 MAGEB5Q9BZ81 275 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 DHX35Q9H5Z1 703 aaKnown RBP18.87■□□□□ 0.61
COPS7A-216ENST00000543170 CATSPERBQ9H7T0 1116 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 OSGEPQ9NPF4 335 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 DONSONQ9NYP3 566 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 RAD54BQ9Y620 910 aa18.87■□□□□ 0.61
COPS7A-216ENST00000543170 ZBTB24O43167 697 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-216ENST00000543170 CREB3O43889 395 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 NDUFA10O95299 355 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 GABRG2P18507 467 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 IL1R2P27930 398 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 ARHGAP25P42331 645 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 CTSOP43234 321 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-216ENST00000543170 PXNP49023 591 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-216ENST00000543170 TPI1P60174 286 aa18.86■□□□□ 0.61
COPS7A-216ENST00000543170 KRT83P78385 493 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms