RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 IFNAR2P48551 515 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 YBEYP58557 167 aaPredicted RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 PPP1R7Q15435 360 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 MPP7Q5T2T1 576 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 C6orf118Q5T5N4 469 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 AFMIDQ63HM1 303 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 TPGS1Q6ZTW0 290 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 SYDE1Q6ZW31 735 aaPredicted RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 B4GALNT4Q76KP1 1039 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 OTOP3Q7RTS5 596 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 JAMLQ86YT9 394 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 CCDC117Q8IWD4 279 aaPredicted RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 ARHGAP12Q8IWW6 846 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 TP53INP2Q8IXH6 220 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 CARNMT1Q8N4J0 409 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 ATPAF2Q8N5M1 289 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 ALLCQ8N6M5 410 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 SUSD6Q92537 303 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 SLCO2A1Q92959 643 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 BHMTQ93088 406 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 LRRC3BQ96PB8 259 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 LGMNQ99538 433 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 FERMT1Q9BQL6 677 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 NOL6Q9H6R4 1146 aaKnown RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 C10orf88Q9H8K7 445 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 THG1LQ9NWX6 298 aaKnown RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 DOCK8Q8NF50 2099 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 NUP205Q92621 2012 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 DENND4AQ7Z401 1863 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 ARHGAP42A6NI28 874 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 RASA4BC9J798 803 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 H0Y626 953 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 KCNN4O15554 427 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 RASA4O43374 803 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 LUC7L3O95232 432 aaKnown RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 IFNB1P01574 187 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 RHOCP08134 193 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 RBL1P28749 1068 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 PAPOLAP51003 745 aaKnown RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 SLC7A5Q01650 507 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 AP1B1Q10567 949 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 SMAD4Q13485 552 aaKnown RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 CDH18Q13634 790 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 PRKD1Q15139 912 aaPredicted RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 ERCC6LQ2NKX8 1250 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 PARP15Q460N3 678 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 HEATR6Q6AI08 1181 aaKnown RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 TANGO2Q6ICL3 276 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 SETD3Q86TU7 594 aaPredicted RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 ZNF354CQ86Y25 554 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 TMEM25Q86YD3 366 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 LRRC49Q8IUZ0 686 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 YAF2Q8IY57 180 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 CCDC89Q8N998 374 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 FAM71DQ8N9W8 422 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 ST13P5Q8NFI4 369 aaPredicted RBP10.94□□□□□ -0.66
DDB1-221ENST00000543162 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 OSCP1Q8WVF1 389 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 IRF7Q92985 503 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 HDAC11Q96DB2 347 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 RAB17Q9H0T7 212 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 MAGEH1Q9H213 219 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 SPHK2Q9NRA0 654 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 PLK2Q9NYY3 685 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 TBC1D30Q9Y2I9 924 aa10.94□□□□□ -0.66
DDB1-221ENST00000543162 ILVBLA1L0T0 632 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 TARSL2A2RTX5 802 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 NEDD8-MDP1E9PL57 170 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 CTIFO43310 598 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 MTSS1O43312 755 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 MBTPS2O43462 519 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 STK10O94804 968 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 KRT14P02533 472 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 HOXD9P28356 352 aaPredicted RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 ETFBP38117 255 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 OXCT1P55809 520 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 GNA12Q03113 381 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 ZNF33AQ06730 810 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 PPIDQ08752 370 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 PTK6Q13882 451 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 PDGFRLQ15198 375 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 ANO4Q32M45 955 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 EML3Q32P44 896 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 LY6G5CQ5SRR4 150 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 FYB2Q5VWT5 728 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 RNF219Q5W0B1 726 aaPredicted RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 CXorf57Q6NSI4 855 aaKnown RBP10.93□□□□□ -0.66
DDB1-221ENST00000543162 VITQ6UXI7 678 aa10.93□□□□□ -0.66
DDB1-221ENST00000543162 ZNF783Q6ZMS7 281 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms