RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 TRIM69Q86WT6 500 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 AADATQ8N5Z0 425 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 UBA3Q8TBC4 463 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 SEMA4DQ92854 862 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 DEPDC7Q96QD5 511 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 DPH1Q9BZG8 443 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 MTG2Q9H4K7 406 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 USP29Q9HBJ7 922 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 FOXD4L1Q9NU39 408 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 TJP2Q9UDY2 1190 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 RCOR1Q9UKL0 485 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 INTS6Q9UL03 887 aaKnown RBP9.25□□□□□ -0.93
UBC-211ENST00000542416 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 COQ4Q9Y3A0 265 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 SPTA1P02549 2419 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 NUMA1Q14980 2115 aa9.25□□□□□ -0.93
UBC-211ENST00000542416 COL5A1P20908 1838 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 NEMP2A6NFY4 417 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 C1QTNF3-AMACRE9PGA6 284 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 PLRG1O43660 514 aaKnown RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 SIGLEC6O43699 453 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 APOEP02649 317 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 GP1BAP07359 652 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 ZSCAN22P10073 491 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 C6P13671 934 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 LSSP48449 732 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 VASPP50552 380 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 DUSP3P51452 185 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 MTA1Q13330 715 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 CNGA2Q16280 664 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 DCAF6Q58WW2 860 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 TTC39BQ5VTQ0 682 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 KDM7AQ6ZMT4 941 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 BEND5Q7L4P6 421 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 KANSL1Q7Z3B3 1105 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 STK40Q8N2I9 435 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 OR4C6Q8NH72 309 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 FAM174AQ8TBP5 190 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 SLC35F5Q8WV83 523 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 OR8D1Q8WZ84 308 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 PTPRN2Q92932 1015 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 KLHDC7BQ96G42 594 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 HIC2Q96JB3 615 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 DUSP23Q9BVJ7 150 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 ABCG4Q9H172 646 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 PREBQ9HCU5 417 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 THSD1Q9NS62 852 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 KLHL11Q9NVR0 708 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 SLC12A6Q9UHW9 1150 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 CYTH4Q9UIA0 394 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 SLCO3A1Q9UIG8 710 aa9.24□□□□□ -0.93
UBC-211ENST00000542416 FARP1Q9Y4F1 1045 aaPredicted RBP9.24□□□□□ -0.93
UBC-211ENST00000542416 B8ZZF3 427 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 WNT9AO14904 365 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 ALOX15BO15296 676 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 OPA1O60313 960 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 F13A1P00488 732 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 CKMT1AP12532 417 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 PFKFB1P16118 471 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 SYKP43405 635 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 ACADSBP45954 432 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 PPP2CBP62714 309 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 PPP2CAP67775 309 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 FOXD4L6Q3SYB3 417 aaPredicted RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 TCERG1LQ5VWI1 586 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 NADSYN1Q6IA69 706 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 PMF1Q6P1K2 205 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 NEK5Q6P3R8 708 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 FOXD4L3Q6VB84 417 aaPredicted RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 SNRNP27Q8WVK2 155 aaKnown RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 KCNE4Q8WWG9 221 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 IFT43Q96FT9 208 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 RPL10LQ96L21 214 aaKnown RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 FCRL2Q96LA5 508 aaPredicted RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 PRICKLE1Q96MT3 831 aaPredicted RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
UBC-211ENST00000542416 CLMPQ9H6B4 373 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 POLR1BQ9H9Y6 1135 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 NCKIPSDQ9NZQ3 722 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 ARHGAP20Q9P2F6 1191 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
UBC-211ENST00000542416 A0A1B0GVL5 298 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 F5H5T6 163 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 M0QYV0 167 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 TRIM38O00635 465 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 SDC3O75056 442 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 RTN2O75298 545 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 USP12O75317 370 aa9.22□□□□□ -0.93
UBC-211ENST00000542416 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
UBC-211ENST00000542416 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms