RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 OPHN1O60890 802 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 CNTN5O94779 1100 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 PPP3CCP48454 512 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 LMAN1P49257 510 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 COG7P83436 770 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ALFQ53S48 1182 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 CAPN12Q6ZSI9 719 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 TMEM150AQ86TG1 271 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 SH2D3CQ8N5H7 860 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 MRPL43Q8N983 215 aaKnown RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 PYROXD1Q8WU10 500 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 EXOC4Q96A65 974 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 RPRD1AQ96P16 312 aaPredicted RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 AGAP3Q96P47 875 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 SERPINB12Q96P63 405 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 CYP2S1Q96SQ9 504 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 PRMT1Q99873 361 aaKnown RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 PIF1Q9H611 641 aa11.3□□□□□ -0.6
SCG3-202ENST00000542355 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
SCG3-202ENST00000542355 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 hCG_2014768A0A024R1R8 64 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 ARHGEF15O94989 841 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 LRG1P02750 347 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 F11P03951 625 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 C8AP07357 584 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 RHOQP17081 205 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 SEMA5AQ13591 1074 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 NADSYN1Q6IA69 706 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 PPP1R21Q6ZMI0 780 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 DENND1CQ8IV53 801 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
SCG3-202ENST00000542355 MYEOVQ96EZ4 313 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 TRPC7Q9HCX4 862 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 SMPD4Q9NXE4 827 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
SCG3-202ENST00000542355 IGLV3-10A0A075B6K4 115 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 DRGXA6NNA5 263 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 WASH4PA8MWX3 477 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 RASGRF2O14827 1237 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 MTSS1O43312 755 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 JCHAINP01591 159 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 CCNCP24863 283 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 PSMB4P28070 264 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 FDFT1P37268 417 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 MAGEA6P43360 314 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 SLC11A2P49281 568 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ZBTB17Q13105 803 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 MTA1Q13330 715 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 QPCTQ16769 361 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TEX44Q53QW1 395 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TXNDC8Q6A555 127 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 FAM109BQ6ICB4 259 aaPredicted RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 CAND1Q86VP6 1230 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 CFAP52Q8N1V2 620 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 FBXO36Q8NEA4 188 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TTC25Q96NG3 672 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ASB3Q9Y575 518 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 IRAK3Q9Y616 596 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 E7ESA3 106 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 EIF3HO15372 352 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCG3-202ENST00000542355 ACSL4O60488 711 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 MAFKO60675 156 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 STC2O76061 302 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 GLUD1P00367 558 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 KLKB1P03952 638 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 IRF1P10914 325 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 TACR2P21452 398 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 GABRR2P28476 465 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ELK3P41970 407 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 GRIA1P42261 906 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 PAPOLAP51003 745 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 PABPC1LQ4VXU2 614 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 DNAJC21Q5F1R6 531 aaKnown RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
SCG3-202ENST00000542355 ACBD5Q5T8D3 534 aaPredicted RBP11.28□□□□□ -0.6
SCG3-202ENST00000542355 AFMIDQ63HM1 303 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms