RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF548Q8NEK5 533 aaPredicted RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 SCG3Q8WXD2 468 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 SAAL1Q96ER3 474 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 CALML4Q96GE6 196 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 ABHD17AQ96GS6 310 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 ACCSQ96QU6 501 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 INTS2Q9H0H0 1204 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 CDH19Q9H159 772 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 DPEP3Q9H4B8 488 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 CSNK1G1Q9HCP0 422 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 MARCH2Q9P0N8 246 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 SEL1LQ9UBV2 794 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 IPO11Q9UI26 975 aaKnown RBP9.82□□□□□ -0.84
YBX3-211ENST00000541351 CLEC4EQ9ULY5 219 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 CEP83Q9Y592 693 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 ZFHX3Q15911 3703 aa9.82□□□□□ -0.84
YBX3-211ENST00000541351 NPHP3-ACAD11A0A0J9YXS1 232 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 A0A1B0GTL3 188 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ZNF233A6NK53 670 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 TISP43B9A030 160 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 D6RAR5 112 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 C1QTNF3-AMACRE9PGA6 284 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 MKRN2OSH3BPM6 223 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 MDM4O15151 490 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 NEBLO76041 1014 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 CSF2P04141 144 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 HMBSP08397 361 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 P4HA1P13674 534 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 NME1P15531 152 aaKnown RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 HNRNPA2B1P22626 353 aaKnown RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 COL8A1P27658 744 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ATICP31939 592 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 UQCRFS1P47985 274 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 PDX1P52945 283 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 MAP3K7CLP57077 242 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 EFEMP1Q12805 493 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ALCAMQ13740 583 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ARSHQ5FYA8 562 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 C9orf64Q5T6V5 341 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 CRTC1Q6UUV9 634 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ZFAND4Q86XD8 727 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 GPD1LQ8N335 351 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 AADATQ8N5Z0 425 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 CCDC112Q8NEF3 446 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 CPT1CQ8TCG5 803 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 SYAP1Q96A49 352 aaPredicted RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 KIAA1143Q96AT1 154 aaPredicted RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 SPAG5Q96R06 1193 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 KIAA1586Q9HCI6 787 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 CASS4Q9NQ75 786 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 OLA1Q9NTK5 396 aaKnown RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 SPASTQ9UBP0 616 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 PCDHB13Q9Y5F0 798 aa9.81□□□□□ -0.84
YBX3-211ENST00000541351 ZFC3H1O60293 1989 aaKnown RBP9.81□□□□□ -0.84
YBX3-211ENST00000541351 FBN3Q75N90 2809 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 PP2D1A8MPX8 630 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 IRAK2O43187 625 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 STX6O43752 255 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 SEMA7AO75326 666 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 CTDNEP1O95476 244 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 STAU1O95793 577 aaKnown RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 FDPSP14324 419 aaKnown RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 MZF1P28698 734 aaPredicted RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 RECQLP46063 649 aaPredicted RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 MAPK10P53779 464 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 PERM1Q5SV97 790 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 ADGRF1Q5T601 910 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 TCTN3Q6NUS6 607 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 ZNF720Q7Z2F6 126 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 CCDC186Q7Z3E2 898 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 PTAR1Q7Z6K3 402 aaPredicted RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 MFN1Q8IWA4 741 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 TTC13Q8NBP0 860 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 RASSF8Q8NHQ8 419 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 OR8D1Q8WZ84 308 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 PTPRN2Q92932 1015 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 USP7Q93009 1102 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 TTC17Q96AE7 1141 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 P2RY11Q96G91 374 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 MMTAG2Q9BU76 263 aaKnown RBP9.8□□□□□ -0.84
YBX3-211ENST00000541351 BOCQ9BWV1 1114 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 SLC4A5Q9BY07 1137 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 OSER1Q9NX31 292 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 GGT7Q9UJ14 662 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 NUDT5Q9UKK9 219 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 PADI4Q9UM07 663 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 CELSR2Q9HCU4 2923 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 ITIH6Q6UXX5 1313 aa9.8□□□□□ -0.84
YBX3-211ENST00000541351 ESPL1Q14674 2120 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 KIF26BQ2KJY2 2108 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 OTOGQ6ZRI0 2925 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 HEATR9A2RTY3 570 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 M0QYT0 321 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 SLC31A1O15431 190 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 ANXA6P08133 673 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 HGFP14210 728 aa9.79□□□□□ -0.84
YBX3-211ENST00000541351 DDIT3P35638 169 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms