RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 GPAMQ9HCL2 828 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 PNPOQ9NVS9 261 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 DTLQ9NZJ0 730 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 PSAT1Q9Y617 370 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 E2F8A0AVK6 867 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 NRP1O14786 923 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 XPO1O14980 1071 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 SIN3BO75182 1162 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 POMCP01189 267 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 CHRNA1P02708 482 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 ATP5BP06576 529 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 ARL4AP40617 200 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 ACADSBP45954 432 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 EPHB1P54762 984 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 PCLAFQ15004 111 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 NCBP2-AS2Q69YL0 99 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 GPRIN1Q7Z2K8 1008 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 SLC7A14Q8TBB6 771 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 HSFY1Q96LI6 401 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 NR1H4Q96RI1 486 aaPredicted RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 AGO3Q9H9G7 860 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 XPNPEP3Q9NQH7 507 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 TMEM30AQ9NV96 361 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 GABRQQ9UN88 632 aa12.82□□□□□ -0.36
RNF4-222ENST00000541204 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
RNF4-222ENST00000541204 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 PDE5AO76074 875 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SESN2P58004 480 aaPredicted RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 ROR2Q01974 943 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 SEMA5AQ13591 1074 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SLC25A52Q3SY17 297 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PPM1JQ5JR12 505 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 VWA5B1Q5TIE3 1220 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 C4orf22Q6V702 233 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 C10orf107Q8IVU9 208 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 EDEM1Q92611 657 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 TRAPPC9Q96Q05 1148 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 ULBP1Q9BZM6 244 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 EBF3Q9H4W6 596 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 S100A14Q9HCY8 104 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PIGVQ9NUD9 493 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 DNAJB4Q9UDY4 337 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SORCS3Q9UPU3 1222 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 INPP5FQ9Y2H2 1132 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 MFSD11O43934 449 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PLIN3O60664 434 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 GLRA3O75311 464 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 FKBP6O75344 327 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 AP1G2O75843 785 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PROCP04070 461 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 THP07101 528 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 USP17L7P0C7H9 530 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 VAV1P15498 845 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 CNTFP26441 200 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 ARRB2P32121 409 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 THPOP40225 353 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SARNPP82979 210 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 PEX6Q13608 980 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 RGMBQ6NW40 437 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 TAF2Q6P1X5 1199 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 RNF111Q6ZNA4 994 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 TOP6BLQ8N6T0 577 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SLC26A7Q8TE54 656 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 TRIB2Q92519 343 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 CCDC124Q96CT7 223 aaKnown RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 PCED1BQ96HM7 432 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 GBP5Q96PP8 586 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.36
RNF4-222ENST00000541204 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 PDP2Q9P2J9 529 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 YJEFN3A6XGL0 299 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 ALDH1A2O94788 518 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 AMHP03971 560 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 CD52P31358 61 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 IDH3AP50213 366 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 COPAP53621 1224 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 DEUP1Q05D60 604 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 NIPAL4Q0D2K0 466 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 IFRD2Q12894 506 aaPredicted RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
RNF4-222ENST00000541204 HIPK4Q8NE63 616 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 SORT1Q99523 831 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
RNF4-222ENST00000541204 FZD10Q9ULW2 581 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms