RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FOXG1P55316 489 aaPredicted RBP6.67□□□□□ -1.34
YBX3-210ENST00000540975 GALNT3Q14435 633 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 C10orf62Q5T681 223 aaPredicted RBP6.67□□□□□ -1.34
YBX3-210ENST00000540975 ASPHD1Q5U4P2 390 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 NUGGCQ68CJ6 796 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 RFX8Q6ZV50 586 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 KLBQ86Z14 1044 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 PIGSQ96S52 555 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 ANAPC4Q9UJX5 808 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 KCND3Q9UK17 655 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 RCE1Q9Y256 329 aa6.67□□□□□ -1.34
YBX3-210ENST00000540975 HMX3A6NHT5 357 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 B4DGG1 531 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 H0Y3Z8 333 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 GRM8O00222 908 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 IPO5O00410 1097 aaKnown RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 NEURL1O76050 574 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 LCKP06239 509 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 SCP2P22307 547 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 PRPH2P23942 346 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 CHKAP35790 457 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 GAD2Q05329 585 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 ZBTB16Q05516 673 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 CDK18Q07002 472 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 ARL13AQ5H913 290 aaPredicted RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 DGAT2L7PQ6IED9 249 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 JMJD6Q6NYC1 403 aaPredicted RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 ANKS1BQ7Z6G8 1248 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 OR6Y1Q8NGX8 325 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 ARRDC3Q96B67 414 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 LTV1Q96GA3 475 aaPredicted RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 HDHD5Q9BXW7 423 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 ARHGAP39Q9C0H5 1083 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 FAM234AQ9H0X4 552 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 TAF1DQ9H5J8 278 aaPredicted RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 SRP68Q9UHB9 627 aaKnown RBP6.66□□□□□ -1.34
YBX3-210ENST00000540975 PKP3Q9Y446 797 aa6.66□□□□□ -1.34
YBX3-210ENST00000540975 FAM90A10PA6NDY2 464 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 FAM90A20PA6NIJ5 464 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 HNRNPRO43390 633 aaKnown RBP6.65□□□□□ -1.34
YBX3-210ENST00000540975 TOMM40O96008 361 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 LDHAP00338 332 aaKnown RBP6.65□□□□□ -1.34
YBX3-210ENST00000540975 CST5P28325 142 aaPredicted RBP6.65□□□□□ -1.34
YBX3-210ENST00000540975 CHRNA5P30532 468 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 PMPCAQ10713 525 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 TIGD6Q17RP2 521 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 PRTGQ2VWP7 1150 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 HMBOX1Q6NT76 420 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 MTFR2Q6P444 385 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 SLC30A9Q6PML9 568 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 ZNF304Q9HCX3 659 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 SLC22A11Q9NSA0 550 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 ARL15Q9NXU5 204 aa6.65□□□□□ -1.34
YBX3-210ENST00000540975 TCRBV7S3A2A0A539 114 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 INSIG1O15503 277 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 OAZ2O95190 189 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 SYF2O95926 243 aaKnown RBP6.64□□□□□ -1.35
YBX3-210ENST00000540975 CHN1P15882 459 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 TBXAS1P24557 533 aaPredicted RBP6.64□□□□□ -1.35
YBX3-210ENST00000540975 STAT1P42224 750 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 RHAGQ02094 409 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 FHL1Q13642 323 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 ALKBH1Q13686 389 aaKnown RBP6.64□□□□□ -1.35
YBX3-210ENST00000540975 SEMA3AQ14563 771 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 PTGR1Q14914 329 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 PDCD2Q16342 344 aaPredicted RBP6.64□□□□□ -1.35
YBX3-210ENST00000540975 LRRC24Q50LG9 513 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 TMEM199Q8N511 208 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 TMEM217Q8N7C4 229 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 PTGR2Q8N8N7 351 aaPredicted RBP6.64□□□□□ -1.35
YBX3-210ENST00000540975 WACQ9BTA9 647 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 EBF3Q9H4W6 596 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 TMLHEQ9NVH6 421 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 COMMD10Q9Y6G5 202 aa6.64□□□□□ -1.35
YBX3-210ENST00000540975 hCG_1642624A0A1W2PR95 340 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 E7EVH7 732 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 KCNAB3O43448 404 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 IFNA2P01563 188 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 PKMP14618 531 aaKnown RBP6.63□□□□□ -1.35
YBX3-210ENST00000540975 VEGFAP15692 232 aaPredicted RBP6.63□□□□□ -1.35
YBX3-210ENST00000540975 POLD2P49005 469 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 PLK5Q496M5 336 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 FAM83BQ5T0W9 1011 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 VWA5B1Q5TIE3 1220 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 SYT13Q7L8C5 426 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 TRAPPC11Q7Z392 1133 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 KDELC2Q7Z4H8 507 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 GPSM1Q86YR5 675 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 MYCT1Q8N699 235 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 CSGALNACT1Q8TDX6 532 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 CAMK1GQ96NX5 476 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 PAGR1Q9BTK6 254 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 TRIM31Q9BZY9 425 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 TASP1Q9H6P5 420 aa6.63□□□□□ -1.35
YBX3-210ENST00000540975 FAM155BO75949 473 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 KRT38O76015 456 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 SNHG28P0DPA3 235 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 OAZ1P54368 228 aa6.62□□□□□ -1.35
YBX3-210ENST00000540975 PDCLQ13371 301 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms