RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 CEP128Q6ZU80 1094 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 C3orf62Q6ZUJ4 267 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 CFAP52Q8N1V2 620 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 ATP11CQ8NB49 1132 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 MAML1Q92585 1016 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 OXNAD1Q96HP4 312 aaPredicted RBP12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 MYRFLQ96LU7 910 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 ZBED2Q9BTP6 218 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 CATSPERBQ9H7T0 1116 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 HSFX1Q9UBD0 423 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 LGALS13Q9UHV8 139 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 PCDHB12Q9Y5F1 795 aa12.57□□□□□ -0.4
AP003559.1-201ENST00000540906 DRGXA6NNA5 263 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 E7EVH7 732 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 NCAM2O15394 837 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 SHOX2O60902 331 aaPredicted RBP12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 PEX11BO96011 259 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 AGTP01019 485 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 SLC2A3P11169 496 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 MYOGP15173 224 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 TACR2P21452 398 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 PPM1AP35813 382 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 ATP5C1P36542 298 aaKnown RBP12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 ALDH1A3P47895 512 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 GNGT1P63211 74 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 ZXDBP98169 803 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 RING1Q06587 406 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 TMED2Q15363 201 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 TEX44Q53QW1 395 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 C4orf22Q6V702 233 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 ATPAF2Q8N5M1 289 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 OR52K2Q8NGK3 314 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 HMCESQ96FZ2 354 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 TSGA13Q96PP4 275 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 XPO6Q96QU8 1125 aaKnown RBP12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 SMYD2Q9NRG4 433 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 FNIP2Q9P278 1114 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 DOCK6Q96HP0 2047 aa12.56□□□□□ -0.4
AP003559.1-201ENST00000540906 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TCRBV9S1A1TA0A576 114 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 CXorf49A8MYA2 514 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 J3KR12 359 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 STC2O76061 302 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 STK10O94804 968 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 OAS1P00973 400 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 F11P03951 625 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 IRF1P10914 325 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 RHOQP17081 205 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 MGAT1P26572 445 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 HTR7P34969 479 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 MPP2Q14168 576 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 KCTD11Q693B1 232 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UNC5AQ6ZN44 842 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PALM2Q8IXS6 379 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UNC5BQ8IZJ1 945 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TRMT2BQ96GJ1 504 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ZFRQ96KR1 1074 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TEKT5Q96M29 485 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PRICKLE1Q96MT3 831 aaPredicted RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 KLHL5Q96PQ7 755 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 APOL2Q9BQE5 337 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 BRD8Q9H0E9 1235 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 GBA3Q9H227 469 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ACSS3Q9H6R3 686 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 KIF9Q9HAQ2 790 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TMEM248Q9NWD8 314 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 PPARGC1AQ9UBK2 798 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 HBS1LQ9Y450 684 aaKnown RBP12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 INSL6Q9Y581 213 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 GRXCR1A8MXD5 290 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 RASA4BC9J798 803 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 RASA4O43374 803 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 ACSL4O60488 711 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 UGT1A9O60656 530 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 CXCL14O95715 111 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
AP003559.1-201ENST00000540906 CCNCP24863 283 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms