RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 C1orf220Q5T0J3 134 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 DSTYKQ6XUX3 929 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 EXOC3L1Q86VI1 746 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 IFNLR1Q8IU57 520 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CLEC4FQ8N1N0 589 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ASB12Q8WXK4 309 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MRPL9Q9BYD2 267 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 H7C0C1 242 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MAGEB3O15480 346 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CLDN3O15551 220 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PHGDHO43175 533 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MYL2P10916 166 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GP5P40197 560 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TP53BP2Q13625 1128 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 FAM187BQ17R55 369 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ARMC4Q5T2S8 1044 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CYP4A22Q5TCH4 519 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SPOPLQ6IQ16 392 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 UNC45BQ8IWX7 931 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 POU5F2Q8N7G0 328 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PSMA8Q8TAA3 256 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 EMID1Q96A84 441 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TAMM41Q96BW9 452 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 OSBPL11Q9BXB4 747 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TMEM120AQ9BXJ8 343 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 EFCAB1Q9HAE3 211 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SLC35C2Q9NQQ7 365 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ARMCX1Q9P291 453 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KIF17Q9P2E2 1029 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TRMT6Q9UJA5 497 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GNPTGQ9UJJ9 305 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GRID1Q9ULK0 1009 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PRPF19Q9UMS4 504 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 RIPK3Q9Y572 518 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ALG6Q9Y672 507 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 COL11A1P12107 1806 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ANKRD63C9JTQ0 380 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ATP9BO43861 1147 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CCNKO75909 580 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 USP1O94782 785 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 FKBP9O95302 570 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ASLP04424 464 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 VCLP18206 1134 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GLRA2P23416 452 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 DNAJB2P25686 324 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PON2Q15165 354 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 RASA2Q15283 850 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 LDLRAP1Q5SW96 308 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CELF3Q5SZQ8 465 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GPR107Q5VW38 600 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 AMER2Q8N7J2 671 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PPM1NQ8N819 430 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 GLG1Q92896 1179 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 FAM213AQ9BRX8 229 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ACAT2Q9BWD1 397 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 OSBPL6Q9BZF3 934 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 PDGFDQ9GZP0 370 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 WDR6Q9NNW5 1121 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 BRD7Q9NPI1 651 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ENTPD7Q9NQZ7 604 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KCNK4Q9NYG8 393 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 V9GYQ6 96 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 IGKV6-21A0A0C4DH24 114 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MAGEB16A2A368 324 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SNAP91O60641 907 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 HLA-DRAP01903 254 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ATP5OP48047 213 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SLC9A3P48764 834 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KPNA1P52294 538 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 SLC5A3P53794 718 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 BFSP2Q13515 415 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 MTFR1Q15390 333 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KCTD19Q17RG1 926 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 DUOXA2Q1HG44 320 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 HMBOX1Q6NT76 420 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 JAMLQ86YT9 394 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 ARID3BQ8IVW6 561 aaPredicted RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 TINF2Q9BSI4 451 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 C9orf16Q9BUW7 83 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KLHL31Q9H511 634 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 CYP3A43Q9HB55 503 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 EXOSC4Q9NPD3 245 aaKnown RBP6.18□□□□□ -1.42
PTPRD-214ENST00000540109 USE1Q9NZ43 259 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 KIAA1257Q9ULG3 409 aa6.18□□□□□ -1.42
PTPRD-214ENST00000540109 HTR3EA5X5Y0 456 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CYP1A1P04798 512 aaPredicted RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CETPP11597 493 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 FMO1Q01740 532 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 FOLH1Q04609 750 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TRAP1Q12931 704 aaKnown RBP6.17□□□□□ -1.42
PTPRD-214ENST00000540109 IZUMO3Q5VZ72 239 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 TTC23Q5W5X9 447 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 BICRALQ6AI39 1079 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 THAP2Q9H0W7 228 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 MKS1Q9NXB0 559 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CACNA2D2Q9NY47 1150 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 ERAP1Q9NZ08 941 aa6.17□□□□□ -1.42
PTPRD-214ENST00000540109 CNOT8Q9UFF9 292 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms