RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SLC6A3Q01959 620 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 NOGQ13253 232 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 RBBP7Q16576 425 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PAN2Q504Q3 1202 aaKnown RBP10.2□□□□□ -0.78
TRAF1-202ENST00000540010 RNF180Q86T96 592 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 TTC30AQ86WT1 665 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 NIPA2Q8N8Q9 360 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 MCRS1Q96EZ8 462 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 MECRQ9BV79 373 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CACNG4Q9UBN1 327 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PGM3O95394 542 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CYBAP13498 195 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CYP2F1P24903 491 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CD52P31358 61 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CDKN2BP42772 138 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PKNOX1P55347 436 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PTK2BQ14289 1009 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 TAF5Q15542 800 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 WSCD1Q658N2 575 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PCSK9Q8NBP7 692 aaKnown RBP10.2□□□□□ -0.78
TRAF1-202ENST00000540010 GDPD5Q8WTR4 605 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 DACH2Q96NX9 599 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CATSPER2Q96P56 530 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 FAM124BQ9H5Z6 455 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PIF1Q9H611 641 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 TCF7L2Q9NQB0 619 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 SRP72O76094 671 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 RAG1P15918 1043 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 NFKBIAP25963 317 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 GRIK1P39086 918 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SCNN1GP51170 649 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 LILRA4P59901 499 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 MMRN1Q13201 1228 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 MPP3Q13368 585 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ACAP1Q15027 740 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF618Q5T7W0 954 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TRABD2AQ86V40 505 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ECHDC2Q86YB7 292 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 NETO2Q8NC67 525 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SAR1AQ9NR31 198 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TRUB2O95900 331 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 POMCP01189 267 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CYP3A5P20815 502 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 MGAT1P26572 445 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 IL1R2P27930 398 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CTGFP29279 349 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SOX4Q06945 474 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 STX5Q13190 355 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PDK2Q15119 407 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TBCCQ15814 346 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 UBXN11Q5T124 520 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 KCNT2Q6UVM3 1135 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SZRD1Q7Z422 152 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 EFHBQ8N7U6 833 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ANKRD52Q8NB46 1076 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SMG8Q8ND04 991 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 STKLD1Q8NE28 680 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 FAM13CQ8NE31 585 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ZSCAN18Q8TBC5 510 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PPP2R3CQ969Q6 453 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TUBGCP3Q96CW5 907 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CDRT15Q96T59 188 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PRPF18Q99633 342 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 DCUN1D5Q9BTE7 237 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 MAN1C1Q9NR34 630 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 THAP1Q9NVV9 213 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SLC17A7Q9P2U7 560 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ARHGEF37A1IGU5 675 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CD48P09326 243 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 KCNE1P15382 129 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 GRK2P25098 689 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CCND3P30281 292 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ACADSBP45954 432 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ADAM17P78536 824 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 KLF1Q13351 362 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 FASTKD3Q14CZ7 662 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SPDYAQ5MJ70 313 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 FAM182AQ5T1J6 154 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 NAPEPLDQ6IQ20 393 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CYP2R1Q6VVX0 501 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SETD3Q86TU7 594 aaPredicted RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 B3GALNT2Q8NCR0 500 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 RNF217Q8TC41 542 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PHF21BQ96EK2 531 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SENP8Q96LD8 212 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 ATXN3LQ9H3M9 355 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 LRRC40Q9H9A6 602 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 LRRC4CQ9HCJ2 640 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TBC1D23Q9NUY8 699 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 DDX43Q9NXZ2 648 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 CLIC5Q9NZA1 410 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SPTLC1O15269 473 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 TM4SF4P48230 202 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 PLK1P53350 603 aa10.19□□□□□ -0.78
TRAF1-202ENST00000540010 MRPS22P82650 360 aaKnown RBP10.19□□□□□ -0.78
TRAF1-202ENST00000540010 SLC1A5Q15758 541 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms