RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 KIAA1614Q5VZ46 1190 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 BBS12Q6ZW61 710 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 GALNT7Q86SF2 657 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 PRIMA1Q86XR5 153 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 BRSK2Q8IWQ3 736 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 SCN4BQ8IWT1 228 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 GALNT16Q8N428 558 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 OR52N4Q8NGI2 321 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 NCSTNQ92542 709 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 ATP2A3Q93084 1043 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 HVCN1Q96D96 273 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 CD180Q99467 661 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 HERC2P3Q9BVR0 1158 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 SLITRK6Q9H5Y7 841 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 STN1Q9H668 368 aaKnown RBP7.26□□□□□ -1.25
TRAV11-201ENST00000539512 PDGFCQ9NRA1 345 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 PTGFRNQ9P2B2 879 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 KLHL13Q9P2N7 655 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 AFG3L2Q9Y4W6 797 aa7.26□□□□□ -1.25
TRAV11-201ENST00000539512 SLC22A23A1A5C7 686 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 LYL1P12980 280 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 MPGP29372 298 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 HOXA7P31268 230 aaPredicted RBP7.25□□□□□ -1.25
TRAV11-201ENST00000539512 ARHGAP8P85298 464 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 SLC30A9Q6PML9 568 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 LVRNQ6Q4G3 990 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 MDGA2Q7Z553 956 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 TEX19Q8NA77 164 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 MASTLQ96GX5 879 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 CADM1Q9BY67 442 aaKnown RBP7.25□□□□□ -1.25
TRAV11-201ENST00000539512 GGA3Q9NZ52 723 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 CNOT7Q9UIV1 285 aaKnown RBP7.25□□□□□ -1.25
TRAV11-201ENST00000539512 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 DHDHQ9UQ10 334 aa7.25□□□□□ -1.25
TRAV11-201ENST00000539512 WDHD1O75717 1129 aaPredicted RBP7.24□□□□□ -1.25
TRAV11-201ENST00000539512 CHRNA5P30532 468 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 CIITAP33076 1130 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 PSMC2P35998 433 aaKnown RBP7.24□□□□□ -1.25
TRAV11-201ENST00000539512 ARHGAP25P42331 645 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 RPS13P62277 151 aaKnown RBP7.24□□□□□ -1.25
TRAV11-201ENST00000539512 NFIL3Q16649 462 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 SLC4A8Q2Y0W8 1093 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 CEP78Q5JTW2 689 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 WDR45BQ5MNZ6 344 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 NAA35Q5VZE5 725 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 MTFR2Q6P444 385 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 ZNF66Q6ZN08 573 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 LRRC8DQ7L1W4 858 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 PAQR4Q8N4S7 273 aaPredicted RBP7.24□□□□□ -1.25
TRAV11-201ENST00000539512 BCAS4Q8TDM0 211 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 HTRA1Q92743 480 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 EVI5LQ96CN4 794 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 IFT27Q9BW83 186 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 SCNM1Q9BWG6 230 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 NRIP3Q9NQ35 241 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 FBXO4Q9UKT5 387 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 ARHGAP26Q9UNA1 814 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 DTX4Q9Y2E6 619 aa7.24□□□□□ -1.25
TRAV11-201ENST00000539512 A0A1B0GVC2 190 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 EPHB2P29323 1055 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 KRT9P35527 623 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 SKIV2L2P42285 1042 aaKnown RBP7.23□□□□□ -1.25
TRAV11-201ENST00000539512 CYP2J2P51589 502 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 CCR5P51681 352 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 BYSLQ13895 437 aaKnown RBP7.23□□□□□ -1.25
TRAV11-201ENST00000539512 GPR68Q15743 365 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 RETSATQ6NUM9 610 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 TMTC1Q8IUR5 882 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 PPM1MQ96MI6 270 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 SH2D3AQ9BRG2 576 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 NPLQ9BXD5 320 aaPredicted RBP7.23□□□□□ -1.25
TRAV11-201ENST00000539512 CTDSP1Q9GZU7 261 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 TMEM160Q9NX00 188 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 FLRT1Q9NZU1 646 aa7.23□□□□□ -1.25
TRAV11-201ENST00000539512 ZNF335Q9H4Z2 1342 aaPredicted RBP7.23□□□□□ -1.25
TRAV11-201ENST00000539512 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 C2CD4BA6NLJ0 364 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 F8W810 466 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 EPB41L2O43491 1005 aaKnown RBP7.22□□□□□ -1.25
TRAV11-201ENST00000539512 HNRNPA1P09651 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRAV11-201ENST00000539512 CD53P19397 219 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 GPD2P43304 727 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 NAA25Q14CX7 972 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 MEX3CQ5U5Q3 659 aaKnown RBP7.22□□□□□ -1.25
TRAV11-201ENST00000539512 FAM171A1Q5VUB5 890 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 ZNF793Q6ZN11 406 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 FAM57BQ71RH2 274 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 RNF144BQ7Z419 303 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 IGFN1Q86VF2 1251 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 HEATR4Q86WZ0 1026 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 TCP11L2Q8N4U5 519 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 PRSS3P2Q8NHM4 247 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 FAM110DQ8TAY7 271 aaPredicted RBP7.22□□□□□ -1.25
TRAV11-201ENST00000539512 RNFT2Q96EX2 444 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 GATA5Q9BWX5 397 aaPredicted RBP7.22□□□□□ -1.25
TRAV11-201ENST00000539512 SLC26A6Q9BXS9 759 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 MROH8Q9H579 483 aa7.22□□□□□ -1.25
TRAV11-201ENST00000539512 TTC12Q9H892 705 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms