RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SAMD15Q9P1V8 674 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 MTRRQ9UBK8 725 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 RRP15Q9Y3B9 282 aaKnown RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 ARHGAP42A6NI28 874 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 FAM155BO75949 473 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 KRT37O76014 449 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 JCHAINP01591 159 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 NFKB1P19838 968 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 C6orf89Q6UWU4 347 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 YTHDF3Q7Z739 585 aaKnown RBP15.16■□□□□ 0.02
ATL3-203ENST00000538786 C14orf80Q86SX3 495 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 LRRC49Q8IUZ0 686 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 MLPHQ9BV36 600 aaPredicted RBP15.16■□□□□ 0.02
ATL3-203ENST00000538786 SLC39A8Q9C0K1 460 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 CWH43Q9H720 699 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 BACE2Q9Y5Z0 518 aa15.16■□□□□ 0.02
ATL3-203ENST00000538786 MAFKO60675 156 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 SNRPAP09012 282 aaKnown RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 ZDHHC11BP0C7U3 371 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CCNB1P14635 433 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CRADDP78560 199 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 PRPSAP1Q14558 356 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MS4A13Q5J8X5 152 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 C10orf120Q5SQS8 335 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 RASIP1Q5U651 963 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 ARHGAP36Q6ZRI8 547 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 ZNF683Q8IZ20 524 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 OXNAD1Q96HP4 312 aaPredicted RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CABS1Q96KC9 395 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 PAIP2Q9BPZ3 127 aaKnown RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CASS4Q9NQ75 786 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 PIH1D1Q9NWS0 290 aaKnown RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 SYBUQ9NX95 663 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MARCH2Q9P0N8 246 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 TET1Q8NFU7 2136 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 ZNF638Q14966 1978 aaKnown RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 SLC38A8A6NNN8 435 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MATN3O15232 486 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 TM9SF1O15321 606 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CACNG3O60359 315 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 TBX18O95935 607 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CSH1P0DML2 217 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CSH2P0DML3 217 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 ATF6P18850 670 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 RFC2P35250 354 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 SLC18A2Q05940 514 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CRYMQ14894 314 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 SLC1A5Q15758 541 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 PSMD5Q16401 504 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 ACBD5Q5T8D3 534 aaPredicted RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 RGS9BPQ6ZS82 235 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 SH2D5Q6ZV89 423 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 KLHDC8BQ8IXV7 354 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 CNTD1Q8N815 330 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 OR52K1Q8NGK4 314 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 SERAC1Q96JX3 654 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 LRRC40Q9H9A6 602 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 TMEM39AQ9NV64 488 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 NDFIP2Q9NV92 336 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 FGFR1OP2Q9NVK5 253 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 MPP6Q9NZW5 540 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 PPARGC1AQ9UBK2 798 aaKnown RBP15.15■□□□□ 0.02
ATL3-203ENST00000538786 SCN5AQ14524 2016 aa15.15■□□□□ 0.02
ATL3-203ENST00000538786 TRIM49D1C9J1S8 452 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 GOLGA8RI6L899 631 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 AP3B1O00203 1094 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 ADAM12O43184 909 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 PSMD3O43242 534 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 KRT38O76015 456 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 KIAA0754O94854 1291 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 IGLV3-27P01718 113 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 POLBP06746 335 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 RHOQP17081 205 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 TAC1P20366 129 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 FOXN2P32314 431 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 SERPINB9P50453 376 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 ITIH4Q14624 930 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 HHATQ5VTY9 493 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 TIGD7Q6NT04 549 aaPredicted RBP15.14■□□□□ 0.01
ATL3-203ENST00000538786 MIB1Q86YT6 1006 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 ANKS4BQ8N8V4 417 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 GIPC2Q8TF65 315 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 VWCEQ96DN2 955 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 IL12RB2Q99665 862 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 ELAC2Q9BQ52 826 aaKnown RBP15.14■□□□□ 0.01
ATL3-203ENST00000538786 VN1R3Q9BXE9 311 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 UBE2OQ9C0C9 1292 aaKnown RBP15.14■□□□□ 0.01
ATL3-203ENST00000538786 PRDM5Q9NQX1 630 aaPredicted RBP15.14■□□□□ 0.01
ATL3-203ENST00000538786 DONSONQ9NYP3 566 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 BFARQ9NZS9 450 aa15.14■□□□□ 0.01
ATL3-203ENST00000538786 ATP11BQ9Y2G3 1177 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms