RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TDRD6O60522 2096 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-206ENST00000538456 ITIH6Q6UXX5 1313 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 TEX51A0A1B0GUA7 166 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 C10orf142B7Z368 130 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 CETN3O15182 167 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LATO43561 262 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 RTN2O75298 545 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 CALCAP01258 141 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 DRD3P35462 400 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 ACTN2P35609 894 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 RXRGP48443 463 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 ILKQ13418 452 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 ELAVL3Q14576 367 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 TBC1D25Q3MII6 688 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 MS4A13Q5J8X5 152 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 TMEM270Q6UE05 265 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LCLAT1Q6UWP7 414 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 ERICH1Q86X53 443 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 SPACA3Q8IXA5 215 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LGI2Q8N0V4 545 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 OXR1Q8N573 874 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 MFSD2AQ8NA29 543 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LSM14AQ8ND56 463 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 DQX1Q8TE96 717 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 SLC35F5Q8WV83 523 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 PTPRN2Q92932 1015 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 AZIN2Q96A70 460 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 LGMNQ99538 433 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 ERVMER34-1Q9H9K5 563 aa14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 XPO7Q9UIA9 1087 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-206ENST00000538456 TRIM38O00635 465 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 SIGLEC6O43699 453 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 BRD2P25440 801 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 MCCD1P59942 119 aaPredicted RBP14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 POM121L1PQ3SYA9 428 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 RAP1GAP2Q684P5 730 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 PCSK4Q6UW60 755 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 PRPF39Q86UA1 669 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 UBR7Q8N806 425 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 DCBLD1Q8N8Z6 715 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 SERPINB11Q96P15 392 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 ZSWIM1Q9BR11 485 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 TPX2Q9ULW0 747 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 NAALADL1Q9UQQ1 740 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 TLR6Q9Y2C9 796 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 CA5BQ9Y2D0 317 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 PCDHB1Q9Y5F3 818 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 MAST4O15021 2626 aa14.47□□□□□ -0.09
SMARCA4-206ENST00000538456 FYNP06241 537 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 TBXAS1P24557 533 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 ACP1P24666 158 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 DAB2P98082 770 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 CFHR1Q03591 330 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 KCNH2Q12809 1159 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 PROX2Q3B8N5 592 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 TAF1BQ53T94 588 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 TAC4Q86UU9 113 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 CHSY1Q86X52 802 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 CIR1Q86X95 450 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 RFFLQ8WZ73 363 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 FAM149B1Q96BN6 582 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 SPATA32Q96LK8 384 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 MYOCQ99972 504 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 ARHGAP20Q9P2F6 1191 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 TJP2Q9UDY2 1190 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 CYTH4Q9UIA0 394 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 KIAA1257Q9ULG3 409 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 COQ4Q9Y3A0 265 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 PCDHB4Q9Y5E5 795 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 COL6A6A6NMZ7 2263 aa14.46□□□□□ -0.09
SMARCA4-206ENST00000538456 FFAR2O15552 330 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 FBXO21O94952 628 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 MT-CO3P00414 261 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 APOEP02649 317 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 MPOP05164 745 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 PAEPP09466 180 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 PDGFRAP16234 1089 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 NNMTP40261 264 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 NUCB2P80303 420 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 STAT4Q14765 748 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 KRBA2Q6ZNG9 492 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 IQCHQ86VS3 1027 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC39A13Q96H72 371 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 SPAG5Q96R06 1193 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 SARDHQ9UL12 918 aa14.45□□□□□ -0.1
SMARCA4-206ENST00000538456 RNF225M0QZC1 329 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 SLC16A3O15427 465 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 PLRG1O43660 514 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 MAGEC1O60732 1142 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 TACR2P21452 398 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 PCBP4P57723 403 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 ZNF211Q13398 564 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 NNTQ13423 1086 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 CNGA2Q16280 664 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 ACCSLQ4AC99 568 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 SETMARQ53H47 684 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 HS1BP3Q53T59 392 aa14.44□□□□□ -0.1
SMARCA4-206ENST00000538456 ZC3H12AQ5D1E8 599 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms