RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PTPRHQ9HD43 1115 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ADCY10Q96PN6 1610 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 BOLA2-SMG1P6H3BVE0 249 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RAD17O75943 681 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RARAP10276 462 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SULT1E1P49888 294 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PSMD4P55036 377 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 C16orf46Q6P387 395 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 AFTPHQ6ULP2 937 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 VPS45Q9NRW7 570 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SLC30A1Q9Y6M5 507 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 MCM3APO60318 1980 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 H0Y858 1186 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CD3EAPO15446 510 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PRKD3O94806 890 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ASNSP08243 561 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 LPCAT4Q643R3 524 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SNRNP48Q6IEG0 339 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PRR23BQ6ZRT6 265 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 LINC00523Q86TU6 105 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ZSCAN5AQ9BUG6 496 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 ARMC7Q9H6L4 198 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 EFR3BQ9Y2G0 817 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 FADS3Q9Y5Q0 445 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 FAM220BPB1ANY3 271 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DLGAP5Q15398 846 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PABPC5Q96DU9 382 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 APOL2Q9BQE5 337 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DENND2DQ9H6A0 471 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PCDH9Q9HC56 1237 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PCDHA6Q9UN73 950 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PSMD13Q9UNM6 376 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PCDHA8Q9Y5H6 950 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 FAM237BA0A1B0GVD1 139 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 CLTBP09497 229 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 FGFR2P21802 821 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 MAGEA8P43361 318 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 FAPQ12884 760 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 SNRNP35Q16560 246 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 RFWD3Q6PCD5 774 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF570Q96NI8 536 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 NAT9Q9BTE0 207 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PLA2R1Q13018 1463 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF804BA4D1E1 1349 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DDX3YO15523 660 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ECT2LQ008S8 904 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PDK4Q16654 411 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 CES3Q6UWW8 571 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 CYP4X1Q8N118 509 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 MINDY2Q8NBR6 621 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 RCN3Q96D15 328 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ENOPH1Q9UHY7 261 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 OVOS2A0A0G2JMS6 1433 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ATP7AQ04656 1500 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 WDR27A2RRH5 827 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 TIPRLO75663 272 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 NPR2P20594 1047 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 S100A2P29034 98 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 AP1S2P56377 157 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 CDC16Q13042 620 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ARSHQ5FYA8 562 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 COLEC12Q5KU26 742 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 SLC22A9Q8IVM8 553 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 FBXO30Q8TB52 745 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ZNF398Q8TD17 642 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 NXNL1Q96CM4 212 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 TEKT5Q96M29 485 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 MRPL4Q9BYD3 311 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 LMCD1Q9NZU5 365 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 M0QX08 132 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 TTC23Q5W5X9 447 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PHC3Q8NDX5 983 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 REEP2Q9BRK0 252 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 BCL2L14Q9BZR8 327 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DNAJC11Q9NVH1 559 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 RAB26Q9ULW5 256 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ANKRD6Q9Y2G4 727 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 OR14I1A6ND48 311 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 TCP10L2B9ZVM9 353 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 PSMD12O00232 456 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DEFA5Q01523 94 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 TNFAIP8L3Q5GJ75 292 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 RNF219Q5W0B1 726 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 OGFOD2Q6N063 350 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 OSCARQ8IYS5 282 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ACTL9Q8TC94 416 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 EXD2Q9NVH0 621 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DPP3Q9NY33 737 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 MAP3K20Q9NYL2 800 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 NDUFAF1Q9Y375 327 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 CLTCL1P53675 1640 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 N4BP2Q86UW6 1770 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 BCLAF3A2AJT9 711 aaKnown RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 DCAF8L1A6NGE4 600 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 KPNA6O60684 536 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 SGPL1O95470 568 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 HNF4AP41235 474 aa5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ARF3P61204 181 aaPredicted RBP5.76□□□□□ -1.49
CSMD1-215ENST00000537824 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms