RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MYL2P10916 166 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 MYLK3Q32MK0 819 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 SV2CQ496J9 727 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 XKR4Q5GH76 650 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 UNC5AQ6ZN44 842 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 TIFABQ6ZNK6 161 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 ARMCX6Q7L4S7 300 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 LIMS2Q7Z4I7 341 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 APPL2Q8NEU8 664 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 RIN3Q8TB24 985 aa18.38■□□□□ 0.53
RAB40C-203ENST00000535977 MBLAC1A4D2B0 266 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 MATKP42679 507 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 TAF6P49848 677 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 KDSRQ06136 332 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 TRIP11Q15643 1979 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GPR142Q7Z601 462 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GSTCDQ8NEC7 633 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 PIP4K2CQ8TBX8 421 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GDPD5Q8WTR4 605 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 KCTD15Q96SI1 283 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 MTMR10Q9NXD2 777 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 XPO1O14980 1071 aaKnown RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 DGKIO75912 1065 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 ATP5BP06576 529 aaKnown RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 SLC5A2P31639 672 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GBE1Q04446 702 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 SLC10A2Q12908 348 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 FAXCQ5TGI0 409 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GRAMD4Q6IC98 578 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 KBTBD7Q8WVZ9 684 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 C7orf26Q96N11 449 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 EIF2B3Q9NR50 452 aaKnown RBP18.37■□□□□ 0.53
RAB40C-203ENST00000535977 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
RAB40C-203ENST00000535977 SF3B1O75533 1304 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■■■ 94.1
RAB40C-203ENST00000535977 METTL18O95568 372 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 LCP1P13796 627 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 ADORA2BP29275 332 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 NAB1Q13506 487 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SYCP2LQ5T4T6 812 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 STXBP5Q5T5C0 1151 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 FAM91A1Q658Y4 838 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 HTR3CQ8WXA8 447 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 DPEP3Q9H4B8 488 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 DMTF1Q9Y222 760 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 MAD1L1Q9Y6D9 718 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 A0A0A0MRY4 1105 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SMIM28A0A1B0GU29 152 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CAPN14A8MX76 684 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CXorf49A8MYA2 514 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-203ENST00000535977 BIRC5O15392 142 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 PDGFRBP09619 1106 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CRHR1P34998 444 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 FOLH1Q04609 750 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 PPIDQ08752 370 aaKnown RBP18.36■□□□□ 0.53
RAB40C-203ENST00000535977 MAP3K21Q5TCX8 1036 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CCDC80Q76M96 950 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 MS4A4AQ96JQ5 239 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SPATA13Q96N96 652 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 NAT9Q9BTE0 207 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 DTLQ9NZJ0 730 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 FZD10Q9ULW2 581 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 FAM237BA0A1B0GVD1 139 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 E9PBE3 544 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 HUS1O60921 280 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 RFPL1O75677 317 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SMIM10L2AP0DMW4 78 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SMIM10L2BP0DMW5 78 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CYP2C9P11712 490 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 CCDC130P13994 396 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 BGNP21810 368 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 HSP90AA5PQ58FG0 334 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 MFSD4BQ5TF39 518 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 STEAP4Q687X5 459 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 NCBP2-AS2Q69YL0 99 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 TMEM53Q6P2H8 277 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 AAGABQ6PD74 315 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 ZNF534Q76KX8 674 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 PLEKHH3Q7Z736 793 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 BBS5Q8N3I7 341 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 TOP6BLQ8N6T0 577 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 ACMSDQ8TDX5 336 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 OSMRQ99650 979 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-203ENST00000535977 PLAC1Q9HBJ0 212 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 KCNK4Q9NYG8 393 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 MOCS1Q9NZB8 636 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 LZTS1Q9Y250 596 aa18.36■□□□□ 0.53
RAB40C-203ENST00000535977 TRMUO75648 421 aaKnown RBP18.35■□□□□ 0.53
RAB40C-203ENST00000535977 F2P00734 622 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 ATP6V1B1P15313 513 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 TFE3P19532 575 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-203ENST00000535977 WARSP23381 471 aaKnown RBP18.35■□□□□ 0.53
RAB40C-203ENST00000535977 LPIN1Q14693 890 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
RAB40C-203ENST00000535977 CXCL16Q9H2A7 254 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 NXF3Q9H4D5 531 aaKnown RBP18.35■□□□□ 0.53
RAB40C-203ENST00000535977 SUN2Q9UH99 717 aa18.35■□□□□ 0.53
RAB40C-203ENST00000535977 TMEM98Q9Y2Y6 226 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms