RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PPP1R3DO95685 299 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 LCKP06239 509 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 RPL15P61313 204 aaKnown RBP5.05□□□□□ -1.6
VBP1-203ENST00000535916 TLE3Q04726 772 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 SLC35G1Q2M3R5 365 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 OTUD1Q5VV17 481 aaPredicted RBP5.05□□□□□ -1.6
VBP1-203ENST00000535916 FBXO38Q6PIJ6 1188 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 GSG1LQ6UXU4 331 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 KDM1BQ8NB78 822 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 RAB21Q9UL25 225 aa5.05□□□□□ -1.6
VBP1-203ENST00000535916 C3orf70A6NLC5 250 aaPredicted RBP5.04□□□□□ -1.6
VBP1-203ENST00000535916 NCK2O43639 380 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 SLC16A2P36021 539 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 PMS2P54278 862 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 DNTTIP2Q5QJE6 756 aaKnown RBP5.04□□□□□ -1.6
VBP1-203ENST00000535916 TMEM88Q6PEY1 159 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 FAM217AQ8IXS0 508 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 ZNF556Q9HAH1 456 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 RNF146Q9NTX7 359 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 SLC12A4Q9UP95 1085 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 SCN5AQ14524 2016 aa5.04□□□□□ -1.6
VBP1-203ENST00000535916 A0A1B0GUV1 79 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 BTBD18B2RXH4 712 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 KIF3BO15066 747 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 NTSR2O95665 410 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 ANXA6P08133 673 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 CHRNB2P17787 502 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 TNFSF8P32971 234 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 GRK5P34947 590 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 CLCN5P51795 746 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 FAM3BP58499 235 aaPredicted RBP5.03□□□□□ -1.6
VBP1-203ENST00000535916 ERVFC1-1P60608 527 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 ZP1P60852 638 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 IFIT5Q13325 482 aaKnown RBP5.03□□□□□ -1.6
VBP1-203ENST00000535916 C9orf57Q5W0N0 161 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.03□□□□□ -1.66e-11■■■■■ 38.7
VBP1-203ENST00000535916 Q6ZSV7 163 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 CCDC25Q86WR0 208 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 B3GNT4Q9C0J1 378 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 CATSPERBQ9H7T0 1116 aa5.03□□□□□ -1.6
VBP1-203ENST00000535916 TRPC5Q9UL62 973 aaPredicted RBP5.03□□□□□ -1.6
VBP1-203ENST00000535916 DOCK7Q96N67 2140 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 TRBV5-7A0A0A0MS05 114 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 SMTNL1A8MU46 457 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 MCIDASD6RGH6 385 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 RPP40O75818 363 aaKnown RBP5.02□□□□□ -1.61
VBP1-203ENST00000535916 DDNO94850 711 aaPredicted RBP5.02□□□□□ -1.61
VBP1-203ENST00000535916 PRSS2P07478 247 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 CYP3A4P08684 503 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 EEF1GP26641 437 aaKnown RBP5.02□□□□□ -1.61
VBP1-203ENST00000535916 CHRNA5P30532 468 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 ADPRHP54922 357 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 KIF5AQ12840 1032 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 DUSP6Q16828 381 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 ERAP2Q6P179 960 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 C16orf82Q7Z2V1 217 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 ARMC9Q7Z3E5 817 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 TRABD2AQ86V40 505 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 CAMK1DQ8IU85 385 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 REXO5Q96IC2 774 aaKnown RBP5.02□□□□□ -1.61
VBP1-203ENST00000535916 FRMD8Q9BZ67 464 aaPredicted RBP5.02□□□□□ -1.61
VBP1-203ENST00000535916 NECTIN3Q9NQS3 549 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 SLC52A1Q9NWF4 448 aa5.02□□□□□ -1.61
VBP1-203ENST00000535916 CYP3A7-CYP3A51PA0A087WV96 503 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 LINC01565O15544 149 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 LIASO43766 372 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 GLP2RO95838 553 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 GLUD1P00367 558 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 PLGP00747 810 aaPredicted RBP5.01□□□□□ -1.61
VBP1-203ENST00000535916 TNFSF4P23510 183 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 CYP3A7P24462 503 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 KLRK1P26718 216 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 STAT1P42224 750 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 GLUD2P49448 558 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 DSC1Q08554 894 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 COBLL1Q53SF7 1204 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 FAM76BQ5HYJ3 339 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 AAGABQ6PD74 315 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 KLBQ86Z14 1044 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 LRRC57Q8N9N7 239 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 CMASQ8NFW8 434 aaPredicted RBP5.01□□□□□ -1.61
VBP1-203ENST00000535916 CLEC4CQ8WTT0 213 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 ZNF566Q969W8 418 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 APOLD1Q96LR9 279 aa5.01□□□□□ -1.61
VBP1-203ENST00000535916 MAGED2Q9UNF1 606 aaPredicted RBP5.01□□□□□ -1.61
VBP1-203ENST00000535916 PRSS47A8MTI9 375 aa5□□□□□ -1.61
VBP1-203ENST00000535916 LDB3O75112 727 aa5□□□□□ -1.61
VBP1-203ENST00000535916 FGF18O76093 207 aa5□□□□□ -1.61
VBP1-203ENST00000535916 ZBTB11O95625 1053 aaPredicted RBP5□□□□□ -1.61
VBP1-203ENST00000535916 FCGR1AP12314 374 aa5□□□□□ -1.61
VBP1-203ENST00000535916 TMPRSS3P57727 454 aa5□□□□□ -1.61
VBP1-203ENST00000535916 RHAGQ02094 409 aa5□□□□□ -1.61
VBP1-203ENST00000535916 ZBTB16Q05516 673 aa5□□□□□ -1.61
VBP1-203ENST00000535916 COASYQ13057 564 aa5□□□□□ -1.61
VBP1-203ENST00000535916 RAB30Q15771 203 aa5□□□□□ -1.61
VBP1-203ENST00000535916 FSCBQ5H9T9 825 aa5□□□□□ -1.61
VBP1-203ENST00000535916 ARL6IP4Q66PJ3 421 aaKnown RBP5□□□□□ -1.61
VBP1-203ENST00000535916 CREB3L2Q70SY1 520 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms