RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TRIM61Q5EBN2 209 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 PITRM1Q5JRX3 1037 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 FAM102AQ5T9C2 384 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 TTC39BQ5VTQ0 682 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 TRNP1Q6NT89 227 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 FBXL22Q6P050 247 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ERICH1Q86X53 443 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CIR1Q86X95 450 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 ZNF677Q86XU0 584 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CCDC117Q8IWD4 279 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 AOPEPQ8N6M6 819 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 MSANTD4Q8NCY6 345 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 CPA5Q8WXQ8 436 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 PRCCQ92733 491 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 RNF34Q969K3 372 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 TOE1Q96GM8 510 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 MYO19Q96H55 970 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 SPAG5Q96R06 1193 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ERGIC2Q96RQ1 377 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 ANLNQ9NQW6 1124 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 ITM2CQ9NQX7 267 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 RRN3Q9NYV6 651 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD4-204ENST00000535810 SLC12A6Q9UHW9 1150 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 EVLQ9UI08 416 aaPredicted RBP9.13□□□□□ -0.95
CHD4-204ENST00000535810 STAP1Q9ULZ2 295 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 HS3ST4Q9Y661 456 aa9.13□□□□□ -0.95
CHD4-204ENST00000535810 GOLGA8SH3BPF8 625 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 TM4SF5O14894 197 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 NDUFS2O75306 463 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 PAGE1O75459 146 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 ADCY5O95622 1261 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 ASLP04424 464 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 CYP1A1P04798 512 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 CDK11BP21127 795 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 MMP8P22894 467 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 GGCXP38435 758 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 STAT1P42224 750 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 CXCR3P49682 368 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 IRAK1P51617 712 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 IRX4P78413 519 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 MTA1Q13330 715 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 AUHQ13825 339 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 NUMA1Q14980 2115 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 HNRNPA1L2Q32P51 320 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 RABGAP1LQ5R372 815 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 IL31Q6EBC2 164 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 CXorf57Q6NSI4 855 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 CAVIN1Q6NZI2 390 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 BNIPLQ7Z465 357 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 DHX40Q8IX18 779 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 APCDD1Q8J025 514 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 CCAR2Q8N163 923 aaKnown RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 KDM1BQ8NB78 822 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 NEK11Q8NG66 645 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 FOXJ1Q92949 421 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 IGSF8Q969P0 613 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 PGAP3Q96FM1 320 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 ZNF419Q96HQ0 510 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 MRGPRX3Q96LB0 322 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 TBCBQ99426 244 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 TKTL2Q9H0I9 626 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 MTG2Q9H4K7 406 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 PRSS16Q9NQE7 514 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 ARHGEF38Q9NXL2 777 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 WSB2Q9NYS7 404 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 KIAA1522Q9P206 1035 aaPredicted RBP9.12□□□□□ -0.95
CHD4-204ENST00000535810 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 VANGL2Q9ULK5 521 aa9.12□□□□□ -0.95
CHD4-204ENST00000535810 WDFY3Q8IZQ1 3526 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 ASCC3Q8N3C0 2202 aaKnown RBP9.11□□□□□ -0.95
CHD4-204ENST00000535810 C4orf47A7E2U8 309 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 CDX4O14627 284 aaPredicted RBP9.11□□□□□ -0.95
CHD4-204ENST00000535810 SIN3BO75182 1162 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 MOCS3O95396 460 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 CFIP05156 583 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 SRPRAP08240 638 aaKnown RBP9.11□□□□□ -0.95
CHD4-204ENST00000535810 ACADMP11310 421 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 PDGFRAP16234 1089 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 OXTRP30559 389 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 NUMBP49757 651 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 ST8SIA6P61647 398 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 RPS14P62263 151 aaKnown RBP9.11□□□□□ -0.95
CHD4-204ENST00000535810 ECT2LQ008S8 904 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 ZBTB16Q05516 673 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 DEUP1Q05D60 604 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 C5orf22Q49AR2 442 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 BRMS1LQ5PSV4 323 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 ZNF776Q68DI1 518 aaPredicted RBP9.11□□□□□ -0.95
CHD4-204ENST00000535810 SLC23A3Q6PIS1 610 aa9.11□□□□□ -0.95
CHD4-204ENST00000535810 TRIM72Q6ZMU5 477 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms