RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 P3H1Q32P28 736 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 AFMIDQ63HM1 303 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 SYCE2Q6PIF2 218 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CHST9Q7L1S5 443 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 ARHGAP12Q8IWW6 846 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 TP53INP2Q8IXH6 220 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CPXM2Q8N436 756 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 GLIS1Q8NBF1 620 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 HJURPQ8NCD3 748 aaPredicted RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 BBOF1Q8ND07 529 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 LRRC45Q96CN5 670 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 SLC39A8Q9C0K1 460 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 KIF9Q9HAQ2 790 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 MTCH2Q9Y6C9 303 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 NDC80O14777 642 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ZSCAN5DPP0CG00 497 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ETS1P14921 441 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 WEE1P30291 646 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 RPS24P62847 133 aaKnown RBP23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 GPS1Q13098 491 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 CBX2Q14781 532 aaPredicted RBP23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 CES5AQ6NT32 575 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 C4orf22Q6V702 233 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 PRUNE1Q86TP1 453 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ARID3BQ8IVW6 561 aaPredicted RBP23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 BBS7Q8IWZ6 715 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ZSCAN18Q8TBC5 510 aaPredicted RBP23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 LRRN4Q8WUT4 740 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ZSWIM3Q96MP5 696 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 FAM129AQ9BZQ8 928 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 WHRNQ9P202 907 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ZNF212Q9UDV6 495 aa23.51■■□□□ 1.35
RBFOX1-206ENST00000535565 ARHGAP42A6NI28 874 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 RAMP2O60895 175 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 PRAMEF12O95522 483 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 VAV1P15498 845 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 H2AFXP16104 143 aaPredicted RBP23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 ITIH2P19823 946 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 YBEYP58557 167 aaPredicted RBP23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 TRADDQ15628 312 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 PARP15Q460N3 678 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 CCDC13Q8IYE1 715 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 ANKRD7Q92527 254 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 TMA16Q96EY4 203 aaKnown RBP23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 P2RY11Q96G91 374 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 ADAM7Q9H2U9 754 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 PAK5Q9P286 719 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 NFU1Q9UMS0 254 aa23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 PRRC2BQ5JSZ5 2229 aaKnown RBP23.5■■□□□ 1.35
RBFOX1-206ENST00000535565 C5orf60A6NFR6 353 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 POU3F3P20264 500 aaPredicted RBP23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 CCNCP24863 283 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 USP4Q13107 963 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 ATAT1Q5SQI0 421 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 C6orf118Q5T5N4 469 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 TIGD7Q6NT04 549 aaPredicted RBP23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 GET4Q7L5D6 327 aaPredicted RBP23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 NPAS3Q8IXF0 933 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 CELF5Q8N6W0 485 aaKnown RBP23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 TDRD5Q8NAT2 981 aaKnown RBP23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 TSGA13Q96PP4 275 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 CHD5Q8TDI0 1954 aa23.49■■□□□ 1.35
RBFOX1-206ENST00000535565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 RASA4BC9J798 803 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 RASA4O43374 803 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 GCATO75600 419 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 SEC31AO94979 1220 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 IVDP26440 423 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 RPL22P35268 128 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 PAPOLAP51003 745 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 SGSHP51688 502 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 ZNF177Q13360 481 aaPredicted RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 POLD3Q15054 466 aaPredicted RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 ZNF77Q15935 545 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 FBXO38Q6PIJ6 1188 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 NOL6Q9H6R4 1146 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 CLDND1Q9NY35 253 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 GDE1Q9NZC3 331 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 GRHL1Q9NZI5 618 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 SEPT10Q9P0V9 454 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 TBC1D14Q9P2M4 693 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 RNF103O00237 685 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 GFRA2O00451 464 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 TBL1XO60907 577 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 CYBBP04839 570 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 IGFBP4P22692 258 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 CAV1Q03135 178 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 CTC1Q2NKJ3 1217 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 MPPE1Q53F39 396 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 IZUMO3Q5VZ72 239 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 EP400NLQ6ZTU2 488 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 PCGF5Q86SE9 256 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 SETD3Q86TU7 594 aaPredicted RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 ZNF354CQ86Y25 554 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 GSPT2Q8IYD1 628 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 HNRNPLLQ8WVV9 542 aaKnown RBP23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 FGF13Q92913 245 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 CLEC1BQ9P126 229 aa23.48■■□□□ 1.35
RBFOX1-206ENST00000535565 A0A0A0MRY4 1105 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms