RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 C3orf70A6NLC5 250 aaPredicted RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 K7EPI3 171 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 SEPT4O43236 478 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 ESRRBO95718 433 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 UQCRBP14927 111 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 STIP1P31948 543 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 MAP3K7CLP57077 242 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TRPC3Q13507 836 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 LDLRAP1Q5SW96 308 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 VSTM1Q6UX27 236 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PACS1Q6VY07 963 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 C11orf74Q86VG3 221 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF410Q86VK4 478 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PHF13Q86YI8 300 aaPredicted RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 NUP93Q8N1F7 819 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 ZFP28Q8NHY6 868 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 HASPINQ8TF76 798 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 SOCS4Q8WXH5 440 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 USTQ9Y2C2 406 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 GOLGA8SH3BPF8 625 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 IFNB1P01574 187 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 ANXA13P27216 316 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 GRIA2P42262 883 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 ITGA9Q13797 1035 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PKDCCQ504Y2 493 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PAQR9Q6ZVX9 377 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 SERINC5Q86VE9 423 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 XYLT1Q86Y38 959 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 HDAC2Q92769 488 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 VPS50Q96JG6 964 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 IMPG2Q9BZV3 1241 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 EPB41L4BQ9H329 900 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 USP29Q9HBJ7 922 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 WDR6Q9NNW5 1121 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TMEM191CA6NGB0 347 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 GOLGA8MH3BSY2 632 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PIRO00625 290 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 MYL2P10916 166 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 RAG1P15918 1043 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PGFP49763 221 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 SP3Q02447 781 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 CD300CQ08708 224 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 NFX1Q12986 1120 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 C15orf59Q2T9L4 293 aaPredicted RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 DEFB115Q30KQ5 88 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 XKR4Q5GH76 650 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 PRPF39Q86UA1 669 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 OSCP1Q8WVF1 389 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 CCDC138Q96M89 665 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TMEM209Q96SK2 561 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TMEM120AQ9BXJ8 343 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TAS2R1Q9NYW7 299 aa9.25□□□□□ -0.93
SF3B2-216ENST00000534765 FAM32AQ9Y421 112 aaKnown RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 TNRC18O15417 2968 aaPredicted RBP9.25□□□□□ -0.93
SF3B2-216ENST00000534765 FUOMA2VDF0 154 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 FCHO1O14526 889 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 NUDT17P0C025 328 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CLCNKBP51801 687 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CSE1LP55060 971 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 FCGRTP55899 365 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ARPP19P56211 112 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SREBF2Q12772 1141 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 FXNQ16595 210 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 MYLK3Q32MK0 819 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 SGO2Q562F6 1265 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 WDR45BQ5MNZ6 344 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 Q8N9G6 341 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ATP2A3Q93084 1043 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TMEM176AQ96HP8 235 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TUBB6Q9BUF5 446 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RSL24D1Q9UHA3 163 aaKnown RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 DMTF1Q9Y222 760 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 NOX1Q9Y5S8 564 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 FAM187AA6NFU0 413 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZSCAN5BA6NJL1 495 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CCRL2O00421 344 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CDH16O75309 829 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 P4HA1P13674 534 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ETS1P14921 441 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 PRKACBP22694 351 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CDH5P33151 784 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 BCAP31P51572 246 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TPTEP56180 551 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 PTPN11Q06124 597 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 RASA2Q15283 850 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZDHHC24Q6UX98 284 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 CROCCP3Q8IVE0 287 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TTC16Q8NEE8 873 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 PRR11Q96HE9 360 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 ZFYVE19Q96K21 471 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 GAD1Q99259 594 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 TSSK1BQ9BXA7 367 aa9.24□□□□□ -0.93
SF3B2-216ENST00000534765 GCOM2Q9BZD3 368 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-216ENST00000534765 OSBPL8Q9BZF1 889 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms