RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 NTAN1Q96AB6 310 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 ALG14Q96F25 216 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 LRIG1Q96JA1 1093 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 GPR174Q9BXC1 333 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 NUCKS1Q9H1E3 243 aaKnown RBP10.71□□□□□ -0.7
CSDE1-217ENST00000534699 PREBQ9HCU5 417 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 INTS6Q9UL03 887 aaKnown RBP10.71□□□□□ -0.7
CSDE1-217ENST00000534699 FHOD1Q9Y613 1164 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 M0QYT0 321 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 VILLO15195 856 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CFIP05156 583 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 MAPKAPK2P49137 400 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 RACK1P63244 317 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 DEUP1Q05D60 604 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CST6Q15828 149 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 GJB7Q6PEY0 223 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CACTIN-AS1Q8N1I8 211 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 NEK11Q8NG66 645 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 IGSF8Q969P0 613 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ISG20Q96AZ6 181 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 TMEM74BQ9NUR3 256 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 SIK3Q9Y2K2 1263 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 OR51B4Q9Y5P0 310 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CHD5Q8TDI0 1954 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 FERP16591 822 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 MMP8P22894 467 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 SGSHP51688 502 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 COPB1P53618 953 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 RPS24P62847 133 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 KRT31Q15323 416 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CXorf57Q6NSI4 855 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 FBXL22Q6P050 247 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 TRIM69Q86WT6 500 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 CREBRFQ8IUR6 639 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ZNF683Q8IZ20 524 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ABCA7Q8IZY2 2146 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 MINDY1Q8N5J2 469 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ASB12Q8WXK4 309 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 STIM2Q9P246 746 aa10.7□□□□□ -0.7
CSDE1-217ENST00000534699 NOCTQ9UK39 431 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 APOBEC2Q9Y235 224 aaKnown RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.7□□□□□ -0.7
CSDE1-217ENST00000534699 ZSCAN5CA6NGD5 496 aaPredicted RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 PAGE1O75459 146 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 ZNF18P17022 549 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SULT1E1P49888 294 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SUOXP51687 545 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 CENPCQ03188 943 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 RAPGEF1Q13905 1077 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SH3PXD2AQ5TCZ1 1133 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 DCP2Q8IU60 420 aaKnown RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 CENPIQ92674 756 aaPredicted RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 RPRD1AQ96P16 312 aaPredicted RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SAMSN1Q9NSI8 373 aaKnown RBP10.69□□□□□ -0.7
CSDE1-217ENST00000534699 HS3ST4Q9Y661 456 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 CACNA1AO00555 2505 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 A0A1W2PPC4 97 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 WASH3PC4AMC7 463 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 MCF2LO15068 1137 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SIN3BO75182 1162 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 C1SP09871 688 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 CD59P13987 128 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SCAPQ12770 1279 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 SYCP1Q15431 976 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 TMCO4Q5TGY1 634 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 RETSATQ6NUM9 610 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 WFDC5Q8TCV5 224 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 FRS2Q8WU20 508 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 CYB5D2Q8WUJ1 264 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 BHMTQ93088 406 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 IFT43Q96FT9 208 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 FAM129BQ96TA1 746 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 FEM1AQ9BSK4 669 aa10.69□□□□□ -0.7
CSDE1-217ENST00000534699 PI4KAP42356 2102 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TRIOO75962 3097 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 ANKRD62A6NC57 917 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TOR1BO14657 336 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PRNPP04156 253 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PROS1P07225 676 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 MZF1P28698 734 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 GRIK2Q13002 908 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 FAM102AQ5T9C2 384 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PRPF39Q86UA1 669 aaKnown RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 SH2D3CQ8N5H7 860 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 KDF1Q8NAX2 398 aaPredicted RBP10.68□□□□□ -0.7
CSDE1-217ENST00000534699 HCAR2Q8TDS4 363 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 ZNF292O60281 2723 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 A0A1W2PQC6 194 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 ANTXRLA6NF34 631 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 PIK3R2O00459 728 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 LATO43561 262 aa10.68□□□□□ -0.7
CSDE1-217ENST00000534699 DKK1O94907 266 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms