RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RBM43	Q6ZSC3	357 aa	Known RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FBXO25	Q8TCJ0	367 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DTX3L	Q8TDB6	740 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	UBE2E3	Q969T4	207 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TM6SF2	Q9BZW4	377 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ASB8	Q9H765	288 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CNGB3	Q9NQW8	809 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MRPS17	Q9Y2R5	130 aa	Known RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	YDJC	A8MPS7	323 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LYPLA2	O95372	231 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PDHA1	P08559	390 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TNFSF9	P41273	254 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PFKP	Q01813	784 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HSDL1	Q3SXM5	330 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	EEF1DP3	Q658K8	133 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PRR23C	Q6ZRP0	262 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TRPM8	Q7Z2W7	1104 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MRPL48	Q96GC5	212 aa	Known RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FAM126A	Q9BYI3	521 aa	Predicted RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	LACRT	Q9GZZ8	138 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	EXOSC4	Q9NPD3	245 aa	Known RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ARL15	Q9NXU5	204 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ANKDD1B	A6NHY2	528 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RPS7	P62081	194 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DEPDC1	Q5TB30	811 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GET4	Q7L5D6	327 aa	Predicted RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SLC9A9	Q8IVB4	645 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ATL1	Q8WXF7	558 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PHF21B	Q96EK2	531 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FAM120B	Q96EK7	910 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MAML3	Q96JK9	1138 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ANKRD6	Q9Y2G4	727 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MRPL42	Q9Y6G3	142 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ADRB2	P07550	413 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PWP1	Q13610	501 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CCDC153	Q494R4	210 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PAPD7	Q5XG87	772 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FAM183BP	Q6ZVS7	135 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FAM35A	Q86V20	835 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PARP9	Q8IXQ6	854 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CLYBL	Q8N0X4	340 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	EPS8L3	Q8TE67	593 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PIK3R5	Q8WYR1	880 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ELMO1	Q92556	727 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NXF3	Q9H4D5	531 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DEC1	Q9P2X7	70 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BTN3A1	O00481	513 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DDX3X	O00571	662 aa	Known RBP eCLIP	16.01	■□□□□ 0.15	4e-7	■■□□□ 14.2
NCAPD3-213	ENST00000534532	CES1	P23141	567 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KDELR1	P24390	212 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SARS	P49591	514 aa	Known RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	IL2	P60568	153 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NAB1	Q13506	487 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	BMPR2	Q13873	1038 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NT5DC1	Q5TFE4	455 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	VSTM1	Q6UX27	236 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ABHD15	Q6UXT9	468 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KIAA1522	Q9P206	1035 aa	Predicted RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DNAJC16	Q9Y2G8	782 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	APOA1	P02647	267 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GJB1	P08034	283 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SLURP2	P0DP57	97 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TFE3	P19532	575 aa	Predicted RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TLX1	P31314	330 aa	Predicted RBP	16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	TRIP10	Q15642	601 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	REXO1L1P	Q8IX06	675 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	MAB21L3	Q8N8X9	362 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	RIPOR3	Q96MK2	946 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	HSD17B14	Q9BPX1	270 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ABCG4	Q9H172	646 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PSME2	Q9UL46	239 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	STARD13	Q9Y3M8	1113 aa		16.01	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NFATC1	O95644	943 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ALB	P02768	609 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GPR15	P49685	360 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	NME5	P56597	212 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SDHAF4	Q5VUM1	108 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CYP20A1	Q6UW02	462 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	METTL6	Q8TCB7	284 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SEC16B	Q96JE7	1060 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OPTC	Q9UBM4	332 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNHIT2	Q9UHR6	403 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNF112	Q9UJU3	913 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ENTPD4	Q9Y227	616 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	CACNB4	O00305	520 aa	Predicted RBP	16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GSTM1	P09488	218 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SERPINB5	P36952	375 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	STARD8	Q92502	1023 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SPATA31D3	P0C874	917 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DLG4	P78352	724 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	OVGP1	Q12889	678 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DUSP4	Q13115	394 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	C15orf59	Q2T9L4	293 aa	Predicted RBP	16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SPATA31D4	Q6ZUB0	917 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PSTK	Q8IV42	348 aa	Known RBP	16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KATNAL2	Q8IYT4	538 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DNAJC1	Q96KC8	554 aa	Known RBP	16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	SYBU	Q9NX95	663 aa		16	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GNPTG	Q9UJJ9	305 aa		16	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms