RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 SCML4Q8N228 414 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 CCDC63Q8NA47 563 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 SPATA22Q8NHS9 363 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 DPF3Q92784 378 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 LRRC39Q96DD0 335 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 SMOC2Q9H3U7 446 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 IGSF9Q9P2J2 1179 aa12.23□□□□□ -0.45
CLP1-205ENST00000533682 USP15Q9Y4E8 981 aaPredicted RBP12.23□□□□□ -0.45
CLP1-205ENST00000533682 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 RFPL1O75677 317 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 ERVK-10P10266 1014 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PDK4Q16654 411 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 TEX44Q53QW1 395 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 CERCAMQ5T4B2 595 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PRSS55Q6UWB4 352 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 PDZD4Q76G19 769 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 TMCO2Q7Z6W1 182 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 MIB1Q86YT6 1006 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 DCP1BQ8IZD4 617 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 ANKS4BQ8N8V4 417 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 ZNF75CPQ92670 426 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 HDAC11Q96DB2 347 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 SEPT5Q99719 369 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 NSRP1Q9H0G5 558 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 OSBPL2Q9H1P3 480 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PHTF1Q9UMS5 762 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 HS3ST4Q9Y661 456 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 NYNRINQ9P2P1 1898 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 ADAM12O43184 909 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 HMBSP08397 361 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 CPB1P15086 417 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 TUBP50607 506 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 SLC18A1P54219 525 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 EFEMP1Q12805 493 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 DUSP4Q13115 394 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 RASIP1Q5U651 963 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PIK3R6Q5UE93 754 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 TTC39BQ5VTQ0 682 aaPredicted RBP12.22□□□□□ -0.45
CLP1-205ENST00000533682 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PRDM16Q9HAZ2 1276 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 PCDHB5Q9Y5E4 795 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 DOCK4Q8N1I0 1966 aa12.22□□□□□ -0.45
CLP1-205ENST00000533682 ARHGEF37A1IGU5 675 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 ATP9BO43861 1147 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 ZWINTO95229 277 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 MT-CYBP00156 380 aaPredicted RBP12.21□□□□□ -0.45
CLP1-205ENST00000533682 GNRH1P01148 92 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 SNRPAP09012 282 aaKnown RBP12.21□□□□□ -0.45
CLP1-205ENST00000533682 CYP2C18P33260 490 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 CDK16Q00536 496 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 OVGP1Q12889 678 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 BFSP2Q13515 415 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
CLP1-205ENST00000533682 MGAT5BQ3V5L5 792 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLP1-205ENST00000533682 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 KDELC2Q7Z4H8 507 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 TFAP2DQ7Z6R9 452 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 MON1AQ86VX9 555 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 DNAAF3Q8N9W5 541 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 LRRC8CQ8TDW0 803 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 GIPC2Q8TF65 315 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 MECRQ9BV79 373 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 SCML2Q9UQR0 700 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 RPS6KL1Q9Y6S9 549 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 GREB1Q4ZG55 1949 aa12.21□□□□□ -0.45
CLP1-205ENST00000533682 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.45
CLP1-205ENST00000533682 E9PAM4 449 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 GOLGA8TH3BQL2 631 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 NCAM2O15394 837 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 AP2A1O95782 977 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 GALTP07902 379 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 MLNP12872 115 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 MX2P20592 715 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 PAX3P23760 479 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 SERPINB6P35237 376 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 ETV4P43268 484 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 NEK3P51956 506 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 SLC18A2Q05940 514 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 TAF10Q12962 218 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 ITIH4Q14624 930 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 PSMD5Q16401 504 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 NFE2Q16621 373 aaPredicted RBP12.21□□□□□ -0.46
CLP1-205ENST00000533682 MANEALQ5VSG8 457 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 KCTD11Q693B1 232 aa12.21□□□□□ -0.46
CLP1-205ENST00000533682 FUT10Q6P4F1 479 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms