RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TTC31Q49AM3 519 aaPredicted RBP17.15■□□□□ 0.34
PKP3-209ENST00000533069 TRIM61Q5EBN2 209 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 SYCP2LQ5T4T6 812 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 TRNP1Q6NT89 227 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 LRRC31Q6UY01 552 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 CIR1Q86X95 450 aaPredicted RBP17.15■□□□□ 0.34
PKP3-209ENST00000533069 CNGA4Q8IV77 575 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 CADM4Q8NFZ8 388 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 TOE1Q96GM8 510 aaKnown RBP17.15■□□□□ 0.34
PKP3-209ENST00000533069 HSPA12BQ96MM6 686 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 CFAP57Q96MR6 1250 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 AGPAT1Q99943 283 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 NUSAP1Q9BXS6 441 aaKnown RBP17.15■□□□□ 0.34
PKP3-209ENST00000533069 PCED1AQ9H1Q7 454 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 RXFP3Q9NSD7 469 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 ADAM22Q9P0K1 906 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 SCML1Q9UN30 329 aa17.15■□□□□ 0.34
PKP3-209ENST00000533069 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 PATE3B3GLJ2 98 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 NRDCO43847 1150 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 RNASEH1O60930 286 aaKnown RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 ENDOD1O94919 500 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 DNTTP04053 509 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 NNMTP40261 264 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 RPS14P62263 151 aaKnown RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 PTP4A2Q12974 167 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 DUOXA1Q1HG43 343 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 WDR45BQ5MNZ6 344 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 ZNF776Q68DI1 518 aaPredicted RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 PPP1R2P3Q6NXS1 205 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 SLC23A3Q6PIS1 610 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 TMC6Q7Z403 805 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 C14orf80Q86SX3 495 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 CACUL1Q86Y37 369 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 SLC41A1Q8IVJ1 513 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 EMC1Q8N766 993 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 C3orf20Q8ND61 904 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 HAPLN3Q96S86 360 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 RSPH9Q9H1X1 276 aaPredicted RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 ANLNQ9NQW6 1124 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 TMEM74BQ9NUR3 256 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
PKP3-209ENST00000533069 SUSD2Q9UGT4 822 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 TBC1D30Q9Y2I9 924 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 SPAG17Q6Q759 2223 aa17.14■□□□□ 0.33
PKP3-209ENST00000533069 EDDM13A0A1B0GTR0 161 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 I6L893 689 aaPredicted RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 KRT3P12035 628 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 MZF1P28698 734 aaPredicted RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 GGCXP38435 758 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 CTSOP43234 321 aaPredicted RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 PTPN9P43378 593 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 VASPP50552 380 aaPredicted RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 IRAK1P51617 712 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 SFSWAPQ12872 951 aaKnown RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 ZNF683Q8IZ20 524 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 DEFB119Q8N690 84 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 BAP1Q92560 729 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 FEM1AQ9BSK4 669 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 GPR174Q9BXC1 333 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 TMEM9BQ9NQ34 198 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
PKP3-209ENST00000533069 DNAH14Q0VDD8 3507 aa17.13■□□□□ 0.33
PKP3-209ENST00000533069 IGLV3-10A0A075B6K4 115 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 DCDC2BA2VCK2 349 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 DRGXA6NNA5 263 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 MEI4A8MW99 385 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SIN3BO75182 1162 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 CFIP05156 583 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SERPINF2P08697 491 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 GNSP15586 552 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 IRX4P78413 519 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 ATP11AP98196 1134 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 TBX2Q13207 712 aaPredicted RBP17.12■□□□□ 0.33
PKP3-209ENST00000533069 TSR1Q2NL82 804 aaKnown RBP17.12■□□□□ 0.33
PKP3-209ENST00000533069 ARL13BQ3SXY8 428 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 MON1BQ7L1V2 547 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
PKP3-209ENST00000533069 FAM131BQ86XD5 332 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 RXFP2Q8WXD0 754 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SELENOOQ9BVL4 669 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SLC25A13Q9UJS0 675 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 VPS28Q9UK41 221 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 CAPN11Q9UMQ6 739 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 SLC6A14Q9UN76 642 aa17.12■□□□□ 0.33
PKP3-209ENST00000533069 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
PKP3-209ENST00000533069 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 MYO18AQ92614 2054 aaKnown RBP17.11■□□□□ 0.33
PKP3-209ENST00000533069 ANKRD62A6NC57 917 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 TTC34A8MYJ7 566 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 E9PAM4 449 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
PKP3-209ENST00000533069 RHOCP08134 193 aa17.11■□□□□ 0.33
PKP3-209ENST00000533069 ZBED6P86452 979 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms