RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FBRSQ9HAH7 460 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 PRSS16Q9NQE7 514 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 ITM2CQ9NQX7 267 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 USP36Q9P275 1121 aaKnown RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 TBC1D30Q9Y2I9 924 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 NUMA1Q14980 2115 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 IGLV3-10A0A075B6K4 115 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ANKRD62A6NC57 917 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 DDX3XO00571 662 aaKnown RBP eCLIP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 AP5Z1O43299 807 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 SRGAP2O75044 1071 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF806P0C7X5 589 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 GZMAP12544 262 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ADRA1BP35368 520 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 HDAC4P56524 1084 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 RPL7AP62424 266 aaKnown RBP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 SULT2A1Q06520 285 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ARID5BQ14865 1188 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 HNRNPA1L2Q32P51 320 aaKnown RBP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ARL13BQ3SXY8 428 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ARTNQ5T4W7 220 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 RNF219Q5W0B1 726 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 CYP2U1Q7Z449 544 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 CACUL1Q86Y37 369 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 OR52K2Q8NGK3 314 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 CPLX3Q8WVH0 158 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 SYN2Q92777 582 aaPredicted RBP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ALG14Q96F25 216 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 MCEEQ96PE7 176 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 PPP1R9BQ96SB3 815 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 FEM1AQ9BSK4 669 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 XPO4Q9C0E2 1151 aaKnown RBP15.81■□□□□ 0.12
CPSF1-210ENST00000532935 SMOC1Q9H4F8 434 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 MTG2Q9H4K7 406 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 VPS45Q9NRW7 570 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 MPP6Q9NZW5 540 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 CAPN11Q9UMQ6 739 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 OR51B4Q9Y5P0 310 aa15.81■□□□□ 0.12
CPSF1-210ENST00000532935 ITIH6Q6UXX5 1313 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 TTC34A8MYJ7 566 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 PRR5-ARHGAP8B1AHC4 643 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 CCP110O43303 1012 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 FOXD2O60548 495 aaPredicted RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 SIN3BO75182 1162 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 TPM3P06753 285 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 RHOCP08134 193 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 C7P10643 843 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ACADMP11310 421 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 PTGER3P43115 390 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 STK19P49842 368 aaPredicted RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 TPMTP51580 245 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF143P52747 638 aaPredicted RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ARHGAP8P85298 464 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ZBED6P86452 979 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 SF3A2Q15428 464 aaKnown RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 TDRD12Q587J7 1177 aaKnown RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 HGSNATQ68CP4 663 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 DCUN1D2Q6PH85 259 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ARMCX6Q7L4S7 300 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 DNAAF5Q86Y56 855 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 CCDC185Q8N715 623 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 RPL10LQ96L21 214 aaKnown RBP15.8■□□□□ 0.12
CPSF1-210ENST00000532935 PARVAQ9NVD7 372 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 SLCO3A1Q9UIG8 710 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ADAMTS9Q9P2N4 1935 aa15.8■□□□□ 0.12
CPSF1-210ENST00000532935 ATMINO43313 823 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 CBFA2T2O43439 604 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 RTN2O75298 545 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 NDUFS2O75306 463 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 IGLV3-19P01714 112 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 GYPCP04921 128 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 CD6P30203 668 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 NNMTP40261 264 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 RPS14P62263 151 aaKnown RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 NRG1Q02297 640 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 MAMLD1Q13495 774 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 RSPO4Q2I0M5 234 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 C9orf64Q5T6V5 341 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 LYSMD4Q5XG99 296 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 PLEKHA7Q6IQ23 1121 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 TFAP2DQ7Z6R9 452 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 SETD3Q86TU7 594 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 DEFB119Q8N690 84 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 C12orf50Q8NA57 414 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 RNF214Q8ND24 703 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 PIGKQ92643 395 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 RMDN1Q96DB5 314 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 TOE1Q96GM8 510 aaKnown RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 ZYG11BQ9C0D3 744 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 WSB2Q9NYS7 404 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 PPARGC1AQ9UBK2 798 aaKnown RBP15.79■□□□□ 0.12
CPSF1-210ENST00000532935 OR12D3Q9UGF7 316 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 SLC25A13Q9UJS0 675 aa15.79■□□□□ 0.12
CPSF1-210ENST00000532935 VPS28Q9UK41 221 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms