RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 P2RY11Q96G91 374 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 ZYG11BQ9C0D3 744 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 SLC39A8Q9C0K1 460 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 CCL26Q9Y258 94 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 TRAV19A0A0A6YYK7 116 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CKMP06732 381 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 RHOQP17081 205 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 PLTPP55058 493 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 GALNT2Q10471 571 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 GPS1Q13098 491 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 PDK1Q15118 436 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 AAK1Q2M2I8 961 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 Q6ZNB5 142 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 ARHGAP36Q6ZRI8 547 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 TAB3Q8N5C8 712 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 RIN3Q8TB24 985 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 RPRD1AQ96P16 312 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 PCDH9Q9HC56 1237 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 HLTFQ14527 1009 aaKnown RBP eCLIP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CBX2Q14781 532 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 P3H1Q32P28 736 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 ADGRF1Q5T601 910 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 BZW1Q7L1Q6 419 aaKnown RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CCDC89Q8N998 374 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CCNYQ8ND76 341 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 TTC16Q8NEE8 873 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 ITFG1Q8TB96 612 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 FBXO25Q8TCJ0 367 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 ART4Q93070 314 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 PRICKLE1Q96MT3 831 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 TMEM248Q9NWD8 314 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CDH22Q9UJ99 828 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 STOML2Q9UJZ1 356 aa22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 USP15Q9Y4E8 981 aaPredicted RBP22.54■■□□□ 1.2
PACSIN3-209ENST00000532457 CLUHO75153 1309 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 HACD1B0YJ81 288 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 MBTPS2O43462 519 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 TSPAN3O60637 253 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 RPS24P62847 133 aaKnown RBP22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 AP1B1Q10567 949 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 CDKL3Q8IVW4 592 aaPredicted RBP22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 CMTM8Q8IZV2 173 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 EIF1ADQ8N9N8 165 aaKnown RBP22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 SUSD6Q92537 303 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 TASP1Q9H6P5 420 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 WHRNQ9P202 907 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 CFAP97Q9P2B7 532 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 THEGQ9P2T0 379 aa22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 MRPS23Q9Y3D9 190 aaKnown RBP22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 ZFP37Q9Y6Q3 630 aaPredicted RBP22.53■■□□□ 1.2
PACSIN3-209ENST00000532457 F5H5T6 163 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 CEBPBP17676 345 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 FSHRP23945 695 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 GARSP41250 739 aaKnown RBP22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ITGA8P53708 1063 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 MTA1Q13330 715 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 CCDC110Q8TBZ0 833 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 HTR3CQ8WXA8 447 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ING5Q8WYH8 240 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 SNF8Q96H20 258 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 RAD54BQ9Y620 910 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 C2orf16Q68DN1 1984 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 LEFTY2O00292 366 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 GFRA2O00451 464 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ITIH2P19823 946 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 WASHC5Q12768 1159 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ACBD5Q5T8D3 534 aaPredicted RBP22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 RHBDF2Q6PJF5 856 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 HTR3DQ70Z44 454 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 UMODL1-AS1Q8N2C9 162 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ZSCAN18Q8TBC5 510 aaPredicted RBP22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 USP13Q92995 863 aaPredicted RBP22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ARGLU1Q9NWB6 273 aaPredicted RBP22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 ZMYM5Q9UJ78 669 aa22.52■■□□□ 1.2
PACSIN3-209ENST00000532457 CFAP69A5D8W1 941 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 DFFAO00273 331 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 PFKLP17858 780 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 SERPINB6P35237 376 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 PPIDQ08752 370 aaKnown RBP22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 ARHGAP15Q53QZ3 475 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 IZUMO3Q5VZ72 239 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 LZTR1Q8N653 840 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 OR52K2Q8NGK3 314 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 PWWP2AQ96N64 755 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 CEP41Q9BYV8 373 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 ARFGAP3Q9NP61 516 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 ARHGAP26Q9UNA1 814 aa22.51■■□□□ 1.19
PACSIN3-209ENST00000532457 C5orf60A6NFR6 353 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 KCNK1O00180 336 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 PPP1R12AO14974 1030 aaPredicted RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 GCATO75600 419 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 PAPOLAP51003 745 aaKnown RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 HEATR6Q6AI08 1181 aaKnown RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 HDAC11Q96DB2 347 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 ANAPC5Q9UJX4 755 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 GRXCR2A6NFK2 248 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 DNALI1O14645 258 aaPredicted RBP22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 NCAM2O15394 837 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 ERLIN1O75477 346 aa22.5■■□□□ 1.19
PACSIN3-209ENST00000532457 DDX6P26196 483 aaKnown RBP eCLIP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms