RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ECE1P42892 770 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MRPS9P82933 396 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 OTUD4Q01804 1114 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 LLGL1Q15334 1064 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 BTLAQ7Z6A9 289 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 DSG4Q86SJ6 1040 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 PIK3C3Q8NEB9 887 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CMASQ8NFW8 434 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZC3H15Q8WU90 426 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 OSCP1Q8WVF1 389 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CDRT15Q96T59 188 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 EYA3Q99504 573 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF385DQ9H6B1 395 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 FANCEQ9HB96 536 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MCM9Q9NXL9 1143 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 DDX56Q9NY93 547 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KLQ9UEF7 1012 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 A8MU76 341 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM38O00635 465 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 GPC4O75487 556 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 WEE2P0C1S8 567 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MBL2P11226 248 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SERPINB1P30740 379 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 NAMPTP43490 491 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 PPP3CAQ08209 521 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 BST2Q10589 180 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 NME3Q13232 169 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 INSCQ1MX18 579 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ANKRD22Q5VYY1 191 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 IQSEC1Q6DN90 963 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 C1orf186Q6ZWK4 172 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLC47A2Q86VL8 602 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZFPM1Q8IX07 1006 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLFN12Q8IYM2 578 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF786Q8N393 782 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 Q8N9G6 341 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 GRPEL2Q8TAA5 225 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 PGBD4Q96DM1 585 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 MAGED4Q96JG8 741 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CDK5RAP1Q96SZ6 601 aaKnown RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 SLA2Q9H6Q3 261 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 AGPAT3Q9NRZ7 376 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 KCND2Q9NZV8 630 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 COPG2Q9UBF2 871 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 UBA2Q9UBT2 640 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-214ENST00000530886 ST14Q9Y5Y6 855 aa8.3□□□□□ -1.08
CSDE1-214ENST00000530886 CCDC195A0A1B0GUA6 201 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 C9IYK1 514 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 CYB561D2O14569 222 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 RFPL2O75678 378 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 GABBR2O75899 941 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM49P0CI25 452 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TRIM49CP0CI26 452 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 GARTP22102 1010 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 NR4A2P43354 598 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 NUDT2P50583 147 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 HK2P52789 917 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TAS2R40P59535 323 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 PPP4CP60510 307 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 UBE2SQ16763 222 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 FASTKD1Q53R41 847 aaKnown RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 HMBOX1Q6NT76 420 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF773Q6PK81 442 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ABRAXAS1Q6UWZ7 409 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 FAM118BQ9BPY3 351 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 SCAF8Q9UPN6 1271 aaKnown RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 PCDHB4Q9Y5E5 795 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 A6NL46 340 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 DEAF1O75398 565 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 NELFEP18615 380 aaKnown RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 CASP3P42574 277 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TAGLNQ01995 201 aaKnown RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 POU6F1Q14863 301 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 CDK10Q15131 360 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ERAP2Q6P179 960 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TMC5Q6UXY8 1006 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 OSTM1Q86WC4 334 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 RALGPS2Q86X27 583 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ZNF677Q86XU0 584 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ANKRD13AQ8IZ07 590 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 CLIP4Q8N3C7 705 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 AFAP1L2Q8N4X5 818 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 TMC2Q8TDI7 906 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 FKBP10Q96AY3 582 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 SLCO4A1Q96BD0 722 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 LENG8Q96PV6 779 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-214ENST00000530886 SENP7Q9BQF6 1050 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ZHX3Q9H4I2 956 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 PCDH12Q9NPG4 1184 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 SMOXQ9NWM0 555 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 STMN3Q9NZ72 180 aa8.29□□□□□ -1.08
CSDE1-214ENST00000530886 ZNRF3Q9ULT6 936 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms