RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 G3BP1Q13283 466 aaKnown RBP eCLIP6.55□□□□□ -1.36
CASP4-208ENST00000530309 ZNF268Q14587 947 aaPredicted RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 RETSATQ6NUM9 610 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 ZNF66Q6ZN08 573 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 GALNT7Q86SF2 657 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 HEATR4Q86WZ0 1026 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 BRSK2Q8IWQ3 736 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 TEX19Q8NA77 164 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 FAM110DQ8TAY7 271 aaPredicted RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 DPF1Q92782 380 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 RNFT2Q96EX2 444 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 TAOK3Q9H2K8 898 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 UBN1Q9NPG3 1134 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 COL11A2P13942 1736 aaPredicted RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 SLC22A23A1A5C7 686 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 WIPF3A6NGB9 483 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 A6NLC8 198 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 SYN3O14994 580 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 TUBB4AP04350 444 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 CD63P08962 238 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 IFIT1P09914 478 aaKnown RBP6.54□□□□□ -1.36
CASP4-208ENST00000530309 TFEBP19484 476 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 PSMC2P35998 433 aaKnown RBP6.54□□□□□ -1.36
CASP4-208ENST00000530309 PGM1P36871 562 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 SLC12A2P55011 1212 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 ARHGAP8P85298 464 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 FOXF2Q12947 444 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 SEMA3AQ14563 771 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 C10orf76Q5T2E6 689 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 MEX3CQ5U5Q3 659 aaKnown RBP6.54□□□□□ -1.36
CASP4-208ENST00000530309 SLC30A9Q6PML9 568 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 BCAS4Q8TDM0 211 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 C2CD4CQ8TF44 421 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 CTDSP1Q9GZU7 261 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 UBA5Q9GZZ9 404 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 TMEM248Q9NWD8 314 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 ARL15Q9NXU5 204 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 TNFSF13BQ9Y275 285 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 TMEM98Q9Y2Y6 226 aa6.54□□□□□ -1.36
CASP4-208ENST00000530309 FNDC1Q4ZHG4 1894 aaPredicted RBP6.53□□□□□ -1.36
CASP4-208ENST00000530309 KCNJ18B7U540 433 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 J3KRW8 73 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 HNRNPA1P09651 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
CASP4-208ENST00000530309 CERS1P27544 350 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 GSTM2P28161 218 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 LIFRP42702 1097 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 LRRC8DQ7L1W4 858 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 KLBQ86Z14 1044 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 GALNT16Q8N428 558 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 SH3KBP1Q96B97 665 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 MPP4Q96JB8 637 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 MAF1Q9H063 256 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 ACAD9Q9H845 621 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 IPO11Q9UI26 975 aaKnown RBP6.53□□□□□ -1.36
CASP4-208ENST00000530309 HSF4Q9ULV5 492 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 TBX20Q9UMR3 447 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 SLC8A2Q9UPR5 921 aa6.53□□□□□ -1.36
CASP4-208ENST00000530309 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 HLA-DQA2P01906 255 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 TYK2P29597 1187 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 DDIT3P35638 169 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 STAT1P42224 750 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 RHAGQ02094 409 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 SLC4A8Q2Y0W8 1093 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 ARL13AQ5H913 290 aaPredicted RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 EARS2Q5JPH6 523 aaKnown RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 CEP78Q5JTW2 689 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 NAA35Q5VZE5 725 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 TSPYL6Q8N831 410 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 ARL14EPQ8N8R7 260 aaPredicted RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 LSM14AQ8ND56 463 aaKnown RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 NCSTNQ92542 709 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 IP6K1Q92551 441 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 FAM118BQ9BPY3 351 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 PHF7Q9BWX1 381 aaPredicted RBP6.52□□□□□ -1.37
CASP4-208ENST00000530309 IL21RQ9HBE5 538 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 PDGFCQ9NRA1 345 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 FLRT1Q9NZU1 646 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 FBXO4Q9UKT5 387 aa6.52□□□□□ -1.37
CASP4-208ENST00000530309 FAM90A7PA6NKC0 464 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 C2CD4BA6NLJ0 364 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 FAM90A22PA8MWA6 464 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 FAM90A12PA8MX19 464 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 FAM90A23PA8MXZ1 464 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 PPP6CO00743 305 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 EPB41L2O43491 1005 aaKnown RBP6.51□□□□□ -1.37
CASP4-208ENST00000530309 GUCY1B2O75343 617 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 RBMXL2O75526 392 aaKnown RBP6.51□□□□□ -1.37
CASP4-208ENST00000530309 PRKCHP24723 683 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 HNF1BP35680 557 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 INHBEP58166 350 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 ZBTB16Q05516 673 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 STIM1Q13586 685 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 BYSLQ13895 437 aaKnown RBP6.51□□□□□ -1.37
CASP4-208ENST00000530309 KIAA1755Q5JYT7 1200 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 SH2D4BQ5SQS7 431 aa6.51□□□□□ -1.37
CASP4-208ENST00000530309 UBE2Q1Q7Z7E8 422 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms