RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
SVIP-204ENST00000530199 DAG1Q14118 895 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 ZNF568Q3ZCX4 644 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 MARCH8Q5T0T0 291 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 ARHGEF16Q5VV41 709 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 PARM1Q6UWI2 310 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 TPRG1Q6ZUI0 275 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 LINC01356Q8N9X3 169 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 ADAM2Q99965 735 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 MYOCQ99972 504 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 PXMP2Q9NR77 195 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 ZDHHC8Q9ULC8 765 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 APC2O95996 2303 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 KAT6AQ92794 2004 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MROH6A6NGR9 719 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 M0QZ92 97 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 INPPL1O15357 1258 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 SLC26A4O43511 780 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 PRDM1O75626 825 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 C1RP00736 705 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 GNAI2P04899 355 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MTHFD1P11586 935 aaKnown RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 ATP5JP18859 108 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MPLP40238 635 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 SATB1Q01826 763 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 METTL7BQ6UX53 244 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MTSS1LQ765P7 747 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 WDR5BQ86VZ2 330 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MYLK4Q86YV6 388 aaPredicted RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 RNF152Q8N8N0 203 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 TP53I13Q8NBR0 393 aaPredicted RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 HDAC7Q8WUI4 952 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 KIAA1191Q96A73 305 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 ZNF707Q96C28 371 aaPredicted RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 CRB3Q9BUF7 120 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 WDR12Q9GZL7 423 aaKnown RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 VPS11Q9H270 941 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 PRKRIP1Q9H875 184 aaPredicted RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 STK39Q9UEW8 545 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 AFF4Q9UHB7 1163 aaKnown RBP7.54□□□□□ -1.2
SVIP-204ENST00000530199 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
SVIP-204ENST00000530199 UBE2QL1A1L167 161 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 DENND3A2RUS2 1198 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 CXorf49A8MYA2 514 aaPredicted RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 MATN2O00339 956 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 CNPP09543 421 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 HSPD1P10809 573 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 ABCB4P21439 1286 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 KLRC2P26717 231 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 ALDH7A1P49419 539 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 LINC00310P59036 64 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 TFAP4Q01664 338 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 GHRHRQ02643 423 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 PPFIA1Q13136 1202 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 CCDC96Q2M329 555 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 HIBCHQ6NVY1 386 aaPredicted RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 GET4Q7L5D6 327 aaPredicted RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 CACNA2D4Q7Z3S7 1137 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 LIX1LQ8IVB5 337 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 NME8Q8N427 588 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SLC35B2Q8TB61 432 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SSH3Q8TE77 659 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 RSPH1Q8WYR4 309 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SMG7Q92540 1137 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 COLEC11Q9BWP8 271 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 DPH1Q9BZG8 443 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 API5Q9BZZ5 524 aaKnown RBP7.53□□□□□ -1.2
SVIP-204ENST00000530199 SLAMF7Q9NQ25 335 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 DKK4Q9UBT3 224 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 STX8Q9UNK0 236 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 LRCH1Q9Y2L9 728 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SHROOM3Q8TF72 1996 aa7.53□□□□□ -1.2
SVIP-204ENST00000530199 SPAG17Q6Q759 2223 aa7.52□□□□□ -1.2
SVIP-204ENST00000530199 SDK1Q7Z5N4 2213 aa7.52□□□□□ -1.2
SVIP-204ENST00000530199 SPTAN1Q13813 2472 aaKnown RBP7.52□□□□□ -1.21
SVIP-204ENST00000530199 DOPEY1Q5JWR5 2465 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 A0A087WV48 116 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 TCRBV7S2A1N4TA0A589 114 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 PJA2O43164 708 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 SLC43A1O75387 559 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
SVIP-204ENST00000530199 AKAP3O75969 853 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
SVIP-204ENST00000530199 METAP2P50579 478 aaKnown RBP eCLIP7.52□□□□□ -1.21
SVIP-204ENST00000530199 RIN1Q13671 783 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 NEDD9Q14511 834 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 TMEM266Q2M3C6 531 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 FAM124AQ86V42 546 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 TMEM173Q86WV6 379 aaPredicted RBP7.52□□□□□ -1.21
SVIP-204ENST00000530199 CCDC33Q8N5R6 958 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 OR6B3Q8NGW1 331 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 DNASE1L2Q92874 299 aa7.52□□□□□ -1.21
SVIP-204ENST00000530199 NMD3Q96D46 503 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms