RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 THSD1Q9NS62 852 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 TSPAN16Q9UKR8 245 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 TRAF3IP3Q9Y228 551 aa17.44■□□□□ 0.38
UBXN1-210ENST00000529640 A0A1B0GVM2 712 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 SLC7A4O43246 635 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 CALUO43852 315 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 LZTS3O60299 673 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 CSO75390 466 aaKnown RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 IL1BP01584 269 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 DGKAP23743 735 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 ECT2LQ008S8 904 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 STAT4Q14765 748 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 FSCBQ5H9T9 825 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 IGF2-ASQ6U949 168 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 MMS22LQ6ZRQ5 1243 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 KCTD13Q8WZ19 329 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 SEMA4DQ92854 862 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 VCPIP1Q96JH7 1222 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 DDX50Q9BQ39 737 aaKnown RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 MMRN2Q9H8L6 949 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 HESX1Q9UBX0 185 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 SLCO3A1Q9UIG8 710 aa17.43■□□□□ 0.38
UBXN1-210ENST00000529640 UBR5O95071 2799 aaPredicted RBP17.43■□□□□ 0.38
UBXN1-210ENST00000529640 PLRG1O43660 514 aaKnown RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 LUC7L3O95232 432 aaKnown RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 MOCS3O95396 460 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 GP1BAP07359 652 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 KRT13P13646 458 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 MAT2AP31153 395 aaKnown RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 GTF2H1P32780 548 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 CSRP3P50461 194 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 TBX4P57082 545 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 DAOAP59103 153 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 NFIL3Q16649 462 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 RNF219Q5W0B1 726 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 KRT39Q6A163 491 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 CCDC117Q8IWD4 279 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 MYEOVQ96EZ4 313 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
UBXN1-210ENST00000529640 UCKL1Q9NWZ5 548 aa17.42■□□□□ 0.38
UBXN1-210ENST00000529640 PRAMEF26H0Y7S4 382 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 K7ENP7 123 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 RTN2O75298 545 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 NR2F2P24468 414 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 METAP1P53582 386 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 SKOR1P84550 965 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 SETMARQ53H47 684 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-210ENST00000529640 SGO2Q562F6 1265 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 MS4A13Q5J8X5 152 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 INO80CQ6PI98 192 aaPredicted RBP17.41■□□□□ 0.38
UBXN1-210ENST00000529640 TMC6Q7Z403 805 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 FAM186BQ8IYM0 893 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 KLHDC7BQ96G42 594 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 SPAG5Q96R06 1193 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 KLHL11Q9NVR0 708 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 FAM13BQ9NYF5 915 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 CEP83Q9Y592 693 aa17.41■□□□□ 0.38
UBXN1-210ENST00000529640 FFAR2O15552 330 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 RNGTTO60942 597 aaKnown RBP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 GIMD1P0DJR0 217 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 SETSIPP0DME0 302 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 MCCD1P59942 119 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 KIF26BQ2KJY2 2108 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 TMEM145Q8NBT3 493 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 FBXL13Q8NEE6 735 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 IRGQQ8WZA9 623 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 RPL10LQ96L21 214 aaKnown RBP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 FCRL2Q96LA5 508 aaPredicted RBP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
UBXN1-210ENST00000529640 USP29Q9HBJ7 922 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 TJP2Q9UDY2 1190 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
UBXN1-210ENST00000529640 PIAS2O75928 621 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 ALPPL2P10696 532 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 LCP1P13796 627 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 VAV1P15498 845 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 NNMTP40261 264 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 STK19P49842 368 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-210ENST00000529640 MXI1P50539 228 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 KCNMA1Q12791 1236 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 DCAF6Q58WW2 860 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 AGBL4Q5VU57 503 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 KIAA1614Q5VZ46 1190 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 PRICKLE2Q7Z3G6 844 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 DSG4Q86SJ6 1040 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 APCDD1Q8J025 514 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 UBA3Q8TBC4 463 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 CCDC97Q96F63 343 aaPredicted RBP17.39■□□□□ 0.37
UBXN1-210ENST00000529640 PAGE5Q96GU1 130 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 APOLD1Q96LR9 279 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 RAB20Q9NX57 234 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 NLGN3Q9NZ94 848 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 SERTAD1Q9UHV2 236 aa17.39■□□□□ 0.37
UBXN1-210ENST00000529640 SATB2Q9UPW6 733 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms