RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CCDC117Q8IWD4 279 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 STK40Q8N2I9 435 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 TMEM145Q8NBT3 493 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 PSMG3-AS1Q96PY0 264 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 PANK2Q9BZ23 570 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 SLC25A18Q9H1K4 315 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 GEMIN8Q9NWZ8 242 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 ACSL6Q9UKU0 697 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 CSNK1G3Q9Y6M4 447 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 NOTCH2Q04721 2471 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 DOPEY2Q9Y3R5 2298 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 LRRK2Q5S007 2527 aa12.04□□□□□ -0.48
AMBRA1-207ENST00000529553 CCDC187A0A096LP49 1063 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 EME2A4GXA9 379 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 NOBOXO60393 691 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 MAT2AP31153 395 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 NNMTP40261 264 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 TKTL1P51854 596 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 PITRM1Q5JRX3 1037 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 RFWD3Q6PCD5 774 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 SV2AQ7L0J3 742 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 PIGZQ86VD9 579 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 ANKRD52Q8NB46 1076 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 HJURPQ8NCD3 748 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 FAXDC2Q96IV6 333 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 SFMBT1Q9UHJ3 866 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 SLCO3A1Q9UIG8 710 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 MAN2B2Q9Y2E5 1009 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
AMBRA1-207ENST00000529553 A0A087X0B3 334 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 TYW5A2RUC4 315 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 ACSL4O60488 711 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 RTN2O75298 545 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 IGLV3-27P01718 113 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 FAM87AP0C7U9 286 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 AFMP43652 599 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 VASPP50552 380 aaPredicted RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 EIF3IQ13347 325 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 ZNF177Q13360 481 aaPredicted RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 TBR1Q16650 682 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 FAM133BQ5BKY9 247 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 SPOPLQ6IQ16 392 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 C14orf80Q86SX3 495 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 NELFCDQ8IXH7 590 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 ZSCAN1Q8NBB4 408 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 IMPG2Q9BZV3 1241 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 DMAC2Q9NW81 257 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 STIM2Q9P246 746 aa12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 TLN1Q9Y490 2541 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-207ENST00000529553 NBPF19A0A087WUL8 3843 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 GOLGA6L7A0A1B0GV03 622 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 TPP1O14773 563 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC6A4P31645 630 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 AKT2P31751 481 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 FOXK1P85037 733 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 SULT2A1Q06520 285 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 CCDC15Q0P6D6 951 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 SLC12A1Q13621 1099 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 MORC3Q14149 939 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 FOXR1Q6PIV2 292 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 SCML4Q8N228 414 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 FAM26EQ8N5C1 309 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 LIN37Q96GY3 246 aaPredicted RBP12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 C7orf25Q9BPX7 421 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 ULBP1Q9BZM6 244 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 ADNPQ9H2P0 1102 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 SEPT10Q9P0V9 454 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 PPM1HQ9ULR3 514 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 HS3ST3A1Q9Y663 406 aa12.01□□□□□ -0.49
AMBRA1-207ENST00000529553 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms