RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 CENPCQ03188 943 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 ZNF177Q13360 481 aaPredicted RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 WDR45BQ5MNZ6 344 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 DAB2IPQ5VWQ8 1189 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 ZNF776Q68DI1 518 aaPredicted RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 RGL4Q8IZJ4 473 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 APCDD1Q8J025 514 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 CADM4Q8NFZ8 388 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 GPR174Q9BXC1 333 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 PCED1AQ9H1Q7 454 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
SSH3-206ENST00000529224 SUSD2Q9UGT4 822 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
SSH3-206ENST00000529224 ITIH6Q6UXX5 1313 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 EDDM13A0A1B0GTR0 161 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 MEI4A8MW99 385 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 SERPINF2P08697 491 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 GNSP15586 552 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 MZF1P28698 734 aaPredicted RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 RDXP35241 583 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 GGCXP38435 758 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 CTSOP43234 321 aaPredicted RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 NSFP46459 744 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 CDH4P55283 916 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 SFSWAPQ12872 951 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 KLHL40Q2TBA0 621 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 TRNP1Q6NT89 227 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 LRRC31Q6UY01 552 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 C14orf80Q86SX3 495 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 SLC30A5Q8TAD4 765 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 C1orf74Q96LT6 269 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 C11orf70Q9BRQ4 267 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 SEPT11Q9NVA2 429 aaKnown RBP13.47□□□□□ -0.25
SSH3-206ENST00000529224 SCML1Q9UN30 329 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 SLC6A14Q9UN76 642 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
SSH3-206ENST00000529224 PLXNA2O75051 1894 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 TTC34A8MYJ7 566 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 TEX33O43247 280 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 SIN3BO75182 1162 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 CALB1P05937 261 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 FERP16591 822 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 ENGP17813 658 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 PTMSP20962 102 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 NOVA1P51513 510 aaKnown RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 IRAK1P51617 712 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 GSCP56915 257 aaPredicted RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 BNIPLQ7Z465 357 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 FAM124AQ86V42 546 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 DNASE2BQ8WZ79 361 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 RPL10LQ96L21 214 aaKnown RBP13.46□□□□□ -0.25
SSH3-206ENST00000529224 HAPLN3Q96S86 360 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 PCDHB18PQ96TA0 734 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 FEM1AQ9BSK4 669 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 FUCA2Q9BTY2 467 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 MTG2Q9H4K7 406 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 CAPN10Q9HC96 672 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 ANLNQ9NQW6 1124 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 ADAM22Q9P0K1 906 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 SLCO3A1Q9UIG8 710 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 SLC25A13Q9UJS0 675 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 MYO6Q9UM54 1294 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 NCKAP1Q9Y2A7 1128 aa13.46□□□□□ -0.25
SSH3-206ENST00000529224 WDFY3Q8IZQ1 3526 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 METTL12A8MUP2 240 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
SSH3-206ENST00000529224 ENDOD1O94919 500 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 RHOCP08134 193 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 SYPP08247 313 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 SDC4P31431 198 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
SSH3-206ENST00000529224 ATXN3P54252 364 aaPredicted RBP13.45□□□□□ -0.26
SSH3-206ENST00000529224 SHC2P98077 582 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 ATP11AP98196 1134 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 SH3PXD2AQ5TCZ1 1133 aa13.45□□□□□ -0.26
SSH3-206ENST00000529224 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms