RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 CCNT2O60583 730 aaKnown RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 MYBPC1Q00872 1141 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 PRAMEF19Q5SWL8 479 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 IGDCC3Q8IVU1 814 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 BRSK2Q8IWQ3 736 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 SPATA6LQ8N4H0 392 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 COLGALT1Q8NBJ5 622 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 ELMO2Q96JJ3 720 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 COX4I2Q96KJ9 171 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 OSBPL6Q9BZF3 934 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 PORCNQ9H237 461 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 AFF4Q9UHB7 1163 aaKnown RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 ZC3H11AO75152 810 aaKnown RBP eCLIP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 PTPN20Q4JDL3 420 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 SH3PXD2AQ5TCZ1 1133 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 WDR49Q8IV35 697 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 ERI1Q8IV48 349 aaKnown RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 TFB1MQ8WVM0 346 aaKnown RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 CPXM1Q96SM3 734 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 C1orf21Q9H246 121 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 DRG1Q9Y295 367 aaKnown RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 SNCAIPQ9Y6H5 919 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 A0A0B4J269 797 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 C3orf70A6NLC5 250 aaPredicted RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 POLBP06746 335 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 TFE3P19532 575 aaPredicted RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 CSE1LP55060 971 aaKnown RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 WASHC5Q12768 1159 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 BHLHE22Q8NFJ8 381 aaPredicted RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 SLC2A14Q8TDB8 520 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 LGMNQ99538 433 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 APOBEC3GQ9HC16 384 aaKnown RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 RAB26Q9ULW5 256 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 UTRNP46939 3433 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 FRMD7Q6ZUT3 714 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 STRA8Q7Z7C7 330 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 EFHBQ8N7U6 833 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 MARK4Q96L34 752 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 ITGAVP06756 1048 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 NFKBIAP25963 317 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 CDH15P55291 814 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 SNRPFP62306 86 aaKnown RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 ADIGQ0VDE8 80 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 SNAPC2Q13487 334 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 KCTD17Q8N5Z5 321 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 C17orf50Q8WW18 174 aa18.25■□□□□ 0.51
LTBP3-210ENST00000528516 DDX1Q92499 740 aaKnown RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 OXCT2Q9BYC2 517 aaPredicted RBP18.25■□□□□ 0.51
LTBP3-210ENST00000528516 hCG_1818297A0A087WSY0 165 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 SH3PXD2BA1X283 911 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 BTBD19C9JJ37 291 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 FBP2O00757 339 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 ITM2AO43736 263 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 KDM1AO60341 852 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 UGT1A9O60656 530 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 DHRS4L1P0CG22 281 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 UNGP13051 313 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 GFAPP14136 432 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 AOC1P19801 751 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 ITGAXP20702 1163 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 GNASQ5JWF2 1037 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 ZNF786Q8N393 782 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 TMEM130Q8N3G9 435 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 CHST13Q8NET6 341 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 TFAP2BQ92481 460 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 EMID1Q96A84 441 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 SENP6Q9GZR1 1112 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 UGT1A7Q9HAW7 530 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 UGT1A10Q9HAW8 530 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 UGT1A8Q9HAW9 530 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 PHGDHO43175 533 aaKnown RBP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 ANKDD1AQ495B1 522 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 C1orf220Q5T0J3 134 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 PLEKHA7Q6IQ23 1121 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 RDM1Q8NG50 284 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 ACTRT2Q8TDY3 377 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 RMND5BQ96G75 393 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 VPS50Q96JG6 964 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 A0A1B0GTW7 788 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 BPGMP07738 259 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 VDRP11473 427 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 COX4I1P13073 169 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 HMOX2P30519 316 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 CPOXP36551 454 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 EMP3P54852 163 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 PHF21BQ96EK2 531 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 FIZ1Q96SL8 496 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 LPIN3Q9BQK8 851 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 GOLGA2P5Q9HBQ8 144 aa18.24■□□□□ 0.51
LTBP3-210ENST00000528516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.24■□□□□ 0.51
LTBP3-210ENST00000528516 A0A1B0GUL6 1792 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms