RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ANKRD62A6NC57 917 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 MEI4A8MW99 385 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 UPK3BL1B0FP48 263 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 UPK3BL2E5RIL1 263 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 PAGE1O75459 146 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 ENDOD1O94919 500 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 PNMA6AP0CW24 399 aaPredicted RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 CEACAM1P13688 526 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 HLA-EP13747 358 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 FERP16591 822 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 ENGP17813 658 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 CSRP1P21291 193 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 KCNA4P22459 653 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 MMP8P22894 467 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 RDXP35241 583 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 NSFP46459 744 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 SULT1E1P49888 294 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 RPS14P62263 151 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 TPM4P67936 248 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 NOMO3P69849 1222 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 FSCBQ5H9T9 825 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 NAA35Q5VZE5 725 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 TCEAL6Q6IPX3 200 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 IL27RAQ6UWB1 636 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 SETD3Q86TU7 594 aaPredicted RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 SLC41A1Q8IVJ1 513 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 DEFB119Q8N690 84 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 WFDC5Q8TCV5 224 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 GANCQ8TET4 914 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 TCEAL3Q969E4 200 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 SKA1Q96BD8 255 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 FEM1AQ9BSK4 669 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 SIK2Q9H0K1 926 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 SLC6A17Q9H1V8 727 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 CAPN10Q9HC96 672 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 OSGEPQ9NPF4 335 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 RXFP3Q9NSD7 469 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 XPO7Q9UIA9 1087 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 SLC25A13Q9UJS0 675 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 TMEM59LQ9UK28 342 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 NOCTQ9UK39 431 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 INTS6Q9UL03 887 aaKnown RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 VANGL2Q9ULK5 521 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 TBC1D30Q9Y2I9 924 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 FARP1Q9Y4F1 1045 aaPredicted RBP9.89□□□□□ -0.83
CHD7-208ENST00000528280 HS3ST4Q9Y661 456 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 MAST4O15021 2626 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 AKAP13Q12802 2813 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 NUP205Q92621 2012 aa9.89□□□□□ -0.83
CHD7-208ENST00000528280 HELZ2Q9BYK8 2649 aaKnown RBP9.88□□□□□ -0.83
CHD7-208ENST00000528280 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ITIH6Q6UXX5 1313 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 CXorf51AA0A1B0GTR3 108 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 DRGXA6NNA5 263 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 PATE3B3GLJ2 98 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 GOLGA8SH3BPF8 625 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 BCAT2O15382 392 aaPredicted RBP9.88□□□□□ -0.83
CHD7-208ENST00000528280 OPHN1O60890 802 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ADH1BP00325 375 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 CALB1P05937 261 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 KRT3P12035 628 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 PDGFRAP16234 1089 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 C5AR1P21730 350 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 SDC4P31431 198 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ZNF165P49910 485 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 PITX1P78337 314 aaPredicted RBP9.88□□□□□ -0.83
CHD7-208ENST00000528280 SLC20A2Q08357 652 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 NCAPHQ15003 741 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 TEAD4Q15561 434 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 C6orf118Q5T5N4 469 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 C9orf64Q5T6V5 341 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 DCAF12L1Q5VU92 463 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 FAM46CQ5VWP2 391 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ZNF783Q6ZMS7 281 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 APCDD1Q8J025 514 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ERLEC1Q96DZ1 483 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 VCPIP1Q96JH7 1222 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 MRGPRX3Q96LB0 322 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 CCDC114Q96M63 670 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 TBCBQ99426 244 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 OMDQ99983 421 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 C2orf49Q9BVC5 232 aaPredicted RBP9.88□□□□□ -0.83
CHD7-208ENST00000528280 EDEM3Q9BZQ6 932 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 PIGVQ9NUD9 493 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 ADAM22Q9P0K1 906 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 FZD4Q9ULV1 537 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
CHD7-208ENST00000528280 WDFY3Q8IZQ1 3526 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 TMEM8BA6NDV4 472 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 LRRC72A6NJI9 287 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 SRRM3A6NNA2 597 aaPredicted RBP9.87□□□□□ -0.83
CHD7-208ENST00000528280 TAF4O00268 1085 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 ALOX15BO15296 676 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 ATP9BO43861 1147 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 SIN3BO75182 1162 aa9.87□□□□□ -0.83
CHD7-208ENST00000528280 KCNK5O95279 499 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms