RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FAM171BQ6P995 826 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 KLHL35Q6PF15 583 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 C11orf57Q6ZUT1 292 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 RFPL4BQ6ZWI9 263 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MARK2Q7KZI7 788 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 TAS1R1Q7RTX1 841 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 GALNT7Q86SF2 657 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 LRRTM3Q86VH5 581 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 CHPFQ8IZ52 775 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SCYL3Q8IZE3 742 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MREGQ8N565 214 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SH2D3CQ8N5H7 860 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 CCDC197Q8NCU1 140 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 OR10H5Q8NGA6 315 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 ZNF333Q96JL9 665 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 FAM20AQ96MK3 541 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 RAB3IPQ96QF0 476 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SEC62Q99442 399 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 NAPGQ99747 312 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MRPL9Q9BYD2 267 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MRPL4Q9BYD3 311 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MRPL1Q9BYD6 325 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SNX25Q9H3E2 840 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 TAF1DQ9H5J8 278 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 BRD9Q9H8M2 597 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SPON1Q9HCB6 807 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 KIAA1586Q9HCI6 787 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 UBN1Q9NPG3 1134 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 PLCB1Q9NQ66 1216 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 C12orf4Q9NQ89 552 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 C8orf4Q9NR00 106 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 ARHGEF3Q9NR81 526 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 FAM114A2Q9NRY5 505 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 FARSBQ9NSD9 589 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 GIN1Q9NXP7 522 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 DDX43Q9NXZ2 648 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 DACT1Q9NYF0 836 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 DBF4Q9UBU7 674 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 PGAP2Q9UHJ9 254 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 TCEAL9Q9UHQ7 104 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 MAP3K2Q9Y2U5 619 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 FPGT-TNNI3KV9GXZ4 949 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 ACEP12821 1306 aa3.86□□□□□ -1.79
CLNS1A-209ENST00000527299 RNF17Q9BXT8 1623 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ZC3H13Q5T200 1668 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 CEP152O94986 1710 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 SUPT6HQ7KZ85 1726 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PTPDC1A2A3K4 754 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 GOLGA8IPA6NC78 632 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 LRRC72A6NJI9 287 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 SIGLEC16A6NMB1 481 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 H7C1D1 291 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 GCOM1H8Y6P7 765 aaPredicted RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 MGST3O14880 152 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ALOX15BO15296 676 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 XPOTO43592 962 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ECE2O60344 883 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ACSL4O60488 711 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 KLHL41O60662 606 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ALDH1L1O75891 902 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 FGF18O76093 207 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ZFPL1O95159 310 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 FYNP06241 537 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 TPBGLP0DKB5 382 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 GSPT1P15170 499 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ZNF12P17014 697 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PRKACAP17612 351 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 DRD4P21917 467 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 IL10P22301 178 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 CRABP2P29373 138 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 TRIM23P36406 574 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 VHLP40337 213 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PRCPP42785 496 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 MTHFRP42898 656 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 SLC1A1P43005 524 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 MSH2P43246 934 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 GSSP48637 474 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 BCAP31P51572 246 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 HNRNPFP52597 415 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 RAD23BP54727 409 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ALDH18A1P54886 795 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PLTPP55058 493 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 HSD17B7P56937 341 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 S100A12P80511 92 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PRKCEQ02156 737 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 CEBPZQ03701 1054 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 DUSP2Q05923 314 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 EXOSC9Q06265 439 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 SIM2Q14190 667 aaPredicted RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 CYTH1Q15438 398 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ZNF174Q15697 407 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 STK11Q15831 433 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 EZH2Q15910 746 aaKnown RBP3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 PARP6Q2NL67 630 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 LEXMQ3ZCV2 418 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 GALNTL6Q49A17 601 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 FBXO43Q4G163 708 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 ODF2Q5BJF6 829 aa3.85□□□□□ -1.79
CLNS1A-209ENST00000527299 CAVIN4Q5BKX8 364 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms