RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 INSCQ1MX18 579 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 ARL13BQ3SXY8 428 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 GRTP1Q5TC63 336 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 PM20D1Q6GTS8 502 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CXCL17Q6UXB2 119 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CD300LGQ6UXG3 332 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CMC1Q7Z7K0 106 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 C10orf107Q8IVU9 208 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 DCLK2Q8N568 766 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 AZIN2Q96A70 460 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 AGAP2Q99490 1192 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 WDCPQ9H6R7 721 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 SNX15Q9NRS6 342 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 TMLHEQ9NVH6 421 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 ZNF358Q9NW07 568 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 H0Y3Z8 333 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 ZNF189O75820 626 aaPredicted RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 USP1O94782 785 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 F9P00740 461 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 ENO1P06733 434 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 NFKB1P19838 968 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 RPL9P32969 192 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 SLC1A6P48664 564 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 GPR162Q16538 588 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 ANKRD20A4Q4UJ75 823 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 CERCAMQ5T4B2 595 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 FAM171BQ6P995 826 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 TEX9Q8N6V9 391 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
USH1C-205ENST00000527020 SMC1BQ8NDV3 1235 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 SORT1Q99523 831 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MTG1Q9BT17 334 aaPredicted RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 BRD8Q9H0E9 1235 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 NEU3Q9UQ49 428 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 DNAJC16Q9Y2G8 782 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MYLKQ15746 1914 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 E2F8A0AVK6 867 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MGEA5O60502 916 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 BDNFP23560 247 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 PCSK1P29120 753 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 CTGFP29279 349 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 TYK2P29597 1187 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 HUNKP57058 714 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 PAN2Q504Q3 1202 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 ACSBG2Q5FVE4 666 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 SERINC5Q86VE9 423 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 RASAL3Q86YV0 1011 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 PPP1R14CQ8TAE6 165 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 PIWIL2Q8TC59 973 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 ATP2A3Q93084 1043 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MFSD3Q96ES6 412 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 RSRC1Q96IZ7 334 aaKnown RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 PKMYT1Q99640 499 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 EPAS1Q99814 870 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MMADHCQ9H3L0 296 aaPredicted RBP17.97■□□□□ 0.47
USH1C-205ENST00000527020 BFARQ9NZS9 450 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 TRHDEQ9UKU6 1024 aa17.97■□□□□ 0.47
USH1C-205ENST00000527020 MX2P20592 715 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 ALDH18A1P54886 795 aaKnown RBP17.96■□□□□ 0.47
USH1C-205ENST00000527020 KPNB1Q14974 876 aaKnown RBP17.96■□□□□ 0.47
USH1C-205ENST00000527020 MAVSQ7Z434 540 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 STRA8Q7Z7C7 330 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 PLD6Q8N2A8 252 aaKnown RBP17.96■□□□□ 0.47
USH1C-205ENST00000527020 DNAAF3Q8N9W5 541 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 WDR60Q8WVS4 1066 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 IRGQQ8WZA9 623 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 CELF6Q96J87 481 aaKnown RBP17.96■□□□□ 0.47
USH1C-205ENST00000527020 TEKT5Q96M29 485 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 APOL2Q9BQE5 337 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 MCMBPQ9BTE3 642 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 DCLRE1BQ9H816 532 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 TXNDC16Q9P2K2 825 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 COPG2Q9UBF2 871 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 ADAM28Q9UKQ2 775 aa17.96■□□□□ 0.47
USH1C-205ENST00000527020 ERI2A8K979 691 aaKnown RBP17.96■□□□□ 0.46
USH1C-205ENST00000527020 B2RBV5 119 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 MTSS1O43312 755 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 SERPINE1P05121 402 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 SERPINA6P08185 405 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 BRCC3P46736 316 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 LIMK2P53671 638 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 EIF4EBP2Q13542 120 aaPredicted RBP17.96■□□□□ 0.46
USH1C-205ENST00000527020 FSTL4Q6MZW2 842 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 OR6Y1Q8NGX8 325 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.46
USH1C-205ENST00000527020 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 MCUR1Q96AQ8 359 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 ATXN7L3BQ96GX2 97 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 TMEM209Q96SK2 561 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 PLA2G4CQ9UP65 541 aa17.96■□□□□ 0.46
USH1C-205ENST00000527020 PRR5-ARHGAP8B1AHC4 643 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 PGK1P00558 417 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 IGLV3-25P01717 112 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 ATP5BP06576 529 aaKnown RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 ZNF135P52742 658 aaPredicted RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 ARHGAP8P85298 464 aa17.95■□□□□ 0.46
USH1C-205ENST00000527020 UBAP2LQ14157 1087 aaKnown RBP17.95■□□□□ 0.46
USH1C-205ENST00000527020 RABGAP1LQ5R372 815 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms