RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	BTAF1	O14981	1849 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	COL18A1	P39060	1754 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A087WZ62	844 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PYCARD-AS1	I3L0S3	204 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	A1BG	P04217	495 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	TXN	P10599	105 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	KLRC1	P26715	233 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	ARHGAP25	P42331	645 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PAPOLA	P51003	745 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	COPA	P53621	1224 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PNLIPRP1	P54315	467 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	DCAF7	P61962	342 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	MAPK7	Q13164	816 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	CTBP1	Q13363	440 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PTCHD3	Q3KNS1	767 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	ALDH1L2	Q3SY69	923 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	SLC18B1	Q6NT16	456 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655		Q6ZWC4	215 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PARS2	Q7L3T8	475 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	GALNT5	Q7Z7M9	940 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKRD23	Q86SG2	305 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	THAP4	Q8WY91	577 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	RFFL	Q8WZ73	363 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	C5orf34	Q96MH7	638 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	CENPO	Q9BU64	300 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	FSD1L	Q9BXM9	530 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	SPRTN	Q9H040	489 aa	Predicted RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	MLXIP	Q9HAP2	919 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	A1CF	Q9NQ94	594 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	OLA1	Q9NTK5	396 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	IRAK4	Q9NWZ3	460 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	TMEM160	Q9NX00	188 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	ZNF212	Q9UDV6	495 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	SNX14	Q9Y5W7	946 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	TRIOBP	Q9H2D6	2365 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	ZNF804B	A4D1E1	1349 aa		5.2	□□□□□ -1.58
SREK1-213	ENST00000523655	TRPM1	Q7Z4N2	1603 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	ABCC11	Q96J66	1382 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	CACNA1I	Q9P0X4	2223 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	LMO7	Q8WWI1	1683 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A1W2PRQ8	180 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	AP4M1	O00189	453 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	PPP6C	O00743	305 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	ASNA1	O43681	348 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	EXOC3	O60645	756 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	ITGA2B	P08514	1039 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	MMP10	P09238	476 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	VIPR2	P41587	438 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	CLNS1A	P54105	237 aa	Known RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	KRT17	Q04695	432 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	ARHGAP15	Q53QZ3	475 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	KIAA1614	Q5VZ46	1190 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	C11orf87	Q6NUJ2	197 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	USP17L6P	Q6QN14	398 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	NEK8	Q86SG6	692 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	GATAD2A	Q86YP4	633 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	CCDC150	Q8NCX0	1101 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	OR56A3	Q8NH54	315 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	RRP36	Q96EU6	259 aa	Known RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	PRPF18	Q99633	342 aa	Known RBP	5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	MESP1	Q9BRJ9	268 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	HELLS	Q9NRZ9	838 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	LPAR3	Q9UBY5	353 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	AASS	Q9UDR5	926 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	BTBD3	Q9Y2F9	522 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655	WDR17	Q8IZU2	1322 aa		5.19	□□□□□ -1.58
SREK1-213	ENST00000523655		E9PCH4	1651 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	LTBP1	Q14766	1721 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A087WWL8	130 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	CCDC196	A0A1B0GTZ2	297 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SMIM35	A0A1B0GVV1	85 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	KCNU1	A8MYU2	1149 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	PLOD3	O60568	738 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	VDR	P11473	427 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	NPPB	P16860	134 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	MCC	P23508	829 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	IL1R2	P27930	398 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	CCR5	P51681	352 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	NAP1L1	P55209	391 aa	Known RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	HOXA4	Q00056	320 aa	Predicted RBP	5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	UBE3A	Q05086	875 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	MYBPC2	Q14324	1141 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	MAPKAPK3	Q16644	382 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	CYP1B1	Q16678	543 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	C1QTNF12	Q5T7M4	302 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SLC9A4	Q6AI14	798 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	KLHL17	Q6TDP4	642 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	KIAA0408	Q6ZU52	694 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	USP49	Q70CQ1	688 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	KRT73	Q86Y46	540 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	SLC15A3	Q8IY34	581 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	MPP5	Q8N3R9	675 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	ZNF366	Q8N895	744 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	LSMEM1	Q8N8F7	131 aa		5.18	□□□□□ -1.58
SREK1-213	ENST00000523655	OR1N1	Q8NGS0	311 aa		5.18	□□□□□ -1.58

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