RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NAPEPLDQ6IQ20 393 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 OXR1Q8N573 874 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 MFSD2AQ8NA29 543 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 RFFLQ8WZ73 363 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 MIS12Q9H081 205 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 NAALADL1Q9UQQ1 740 aa23.5■■□□□ 1.35
PVT1-218ENST00000523328 CFAP46Q8IYW2 2715 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3DA0A087WVF3 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3IA0A087WXS9 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3EA0A087X179 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3KA0A087X1G2 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3FA6NER0 549 aaPredicted RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3LB9A6J9 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 ZNF202O95125 648 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 MOCS2O96007 188 aaPredicted RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 CALCAP01258 141 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 IL1BP01584 269 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3HP0C7X1 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 CKMT2P17540 419 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 BRD2P25440 801 aaKnown RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 STK19P49842 368 aaPredicted RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 METAP1P53582 386 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 PMS1P54277 932 aaKnown RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 ELAVL3Q14576 367 aaKnown RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3GQ6DHY5 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3CQ6IPX1 549 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 TBC1D3Q8IZP1 549 aaPredicted RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 CACTIN-AS1Q8N1I8 211 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 LSM14AQ8ND56 463 aaKnown RBP23.49■■□□□ 1.35
PVT1-218ENST00000523328 BAP1Q92560 729 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 CEP83Q9Y592 693 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 PCDHB4Q9Y5E5 795 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 MGAQ8IWI9 3026 aa23.49■■□□□ 1.35
PVT1-218ENST00000523328 A0A1W2PQ27 194 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 A0A1W2PQ64 194 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 VAV1P15498 845 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 FKBP3Q00688 224 aaKnown RBP23.48■■□□□ 1.35
PVT1-218ENST00000523328 STILQ15468 1287 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 RNF219Q5W0B1 726 aaPredicted RBP23.48■■□□□ 1.35
PVT1-218ENST00000523328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.48■■□□□ 1.35
PVT1-218ENST00000523328 TAC4Q86UU9 113 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 LGI2Q8N0V4 545 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 FGF11Q92914 225 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 KAT5Q92993 513 aa23.48■■□□□ 1.35
PVT1-218ENST00000523328 BRINP1O60477 761 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 ACP1P24666 158 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 RPL34P49207 117 aaKnown RBP23.47■■□□□ 1.35
PVT1-218ENST00000523328 INSM1Q01101 510 aaPredicted RBP23.47■■□□□ 1.35
PVT1-218ENST00000523328 PROX2Q3B8N5 592 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 SYPL2Q5VXT5 272 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 RAP1GAP2Q684P5 730 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 ANKRD40Q6AI12 368 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 IQCHQ86VS3 1027 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 KDM4CQ9H3R0 1056 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 ARMCX3Q9UH62 379 aaPredicted RBP23.47■■□□□ 1.35
PVT1-218ENST00000523328 CYTH4Q9UIA0 394 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 CLCA2Q9UQC9 943 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 ZDHHC9Q9Y397 364 aa23.47■■□□□ 1.35
PVT1-218ENST00000523328 TDRD6O60522 2096 aaKnown RBP23.46■■□□□ 1.35
PVT1-218ENST00000523328 RTN2O75298 545 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 TACR2P21452 398 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 GLDCP23378 1020 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 FMO5P49326 533 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 NUMBP49757 651 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 COBLL1Q53SF7 1204 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 PRPF39Q86UA1 669 aaKnown RBP23.46■■□□□ 1.35
PVT1-218ENST00000523328 DCBLD1Q8N8Z6 715 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 FRS2Q8WU20 508 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 FAM149B1Q96BN6 582 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 ZNF462Q96JM2 2506 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 NT5C1BQ96P26 610 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 SPAG5Q96R06 1193 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 TSG101Q99816 390 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 SARDHQ9UL12 918 aa23.46■■□□□ 1.35
PVT1-218ENST00000523328 PLRG1O43660 514 aaKnown RBP23.45■■□□□ 1.34
PVT1-218ENST00000523328 MAT2AP31153 395 aaKnown RBP23.45■■□□□ 1.34
PVT1-218ENST00000523328 TLE3Q04726 772 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 OVGP1Q12889 678 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 PNOCQ13519 176 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 ZC3H12AQ5D1E8 599 aaKnown RBP23.45■■□□□ 1.34
PVT1-218ENST00000523328 BEND5Q7L4P6 421 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 CHSY1Q86X52 802 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 ERICH1Q86X53 443 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 PPM1KQ8N3J5 372 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 DMTF1Q9Y222 760 aa23.45■■□□□ 1.34
PVT1-218ENST00000523328 TEX51A0A1B0GUA7 166 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 TRIM49BA6NDI0 452 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 PMM2O15305 246 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 SLC7A4O43246 635 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 MAGEC1O60732 1142 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 SDC3O75056 442 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 APOEP02649 317 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 NUDT1P36639 197 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 NNMTP40261 264 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 GPD2P43304 727 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 SLC12A1Q13621 1099 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 TBC1D25Q3MII6 688 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 ZNF658Q5TYW1 1059 aaPredicted RBP23.44■■□□□ 1.34
PVT1-218ENST00000523328 PCSK4Q6UW60 755 aa23.44■■□□□ 1.34
PVT1-218ENST00000523328 GPR155Q7Z3F1 870 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms