RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SLC13A5Q86YT5 568 aaPredicted RBP12.72□□□□□ -0.37
PABPC1-219ENST00000522387 KLHL7Q8IXQ5 586 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 YAF2Q8IY57 180 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
PABPC1-219ENST00000522387 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 KRT12Q99456 494 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 ZNF670Q9BS34 389 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 KCNK12Q9HB15 430 aa12.72□□□□□ -0.37
PABPC1-219ENST00000522387 ATG2BQ96BY7 2078 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 H0Y626 953 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 AGPSO00116 658 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 MFSD11O43934 449 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 PSMC3P17980 439 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 CHKAP35790 457 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 SOX9P48436 509 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 IFNAR2P48551 515 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 DPYSQ14117 519 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 SMAD2Q15796 467 aaKnown RBP12.71□□□□□ -0.37
PABPC1-219ENST00000522387 NCBP2-AS2Q69YL0 99 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 DDX42Q86XP3 938 aaKnown RBP eCLIP12.71□□□□□ -0.37
PABPC1-219ENST00000522387 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.37
PABPC1-219ENST00000522387 AENQ8WTP8 325 aaKnown RBP12.71□□□□□ -0.37
PABPC1-219ENST00000522387 PHF7Q9BWX1 381 aaPredicted RBP12.71□□□□□ -0.37
PABPC1-219ENST00000522387 KRIT1O00522 736 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 TJP3O95049 919 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 TYRP14679 529 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 PFKLP17858 780 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 CETN2P41208 172 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 KCNJ1P48048 391 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 MESP2Q0VG99 397 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 MANEALQ5VSG8 457 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 C8orf74Q6P047 294 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 ARHGAP36Q6ZRI8 547 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 IRF7Q92985 503 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 PBKQ96KB5 322 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 BPTFQ12830 3046 aa12.71□□□□□ -0.38
PABPC1-219ENST00000522387 NUP210Q8TEM1 1887 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 PGRMC1O00264 195 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 APOL1O14791 398 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 CDH18Q13634 790 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DHCR24Q15392 516 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 EML3Q32P44 896 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 LEXMQ3ZCV2 418 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 RABGAP1LQ5R372 815 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 C12orf40Q86WS4 652 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 MFN1Q8IWA4 741 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 CCNYQ8ND76 341 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 P3H4Q92791 437 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 LGMNQ99538 433 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 CEP41Q9BYV8 373 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ZMYM5Q9UJ78 669 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ACTL7AQ9Y615 435 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ANTXRLA6NF34 631 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DCLK1O15075 740 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 NARSO43776 548 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 HOXD9P28356 352 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 OTUD4Q01804 1114 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 KLF1Q13351 362 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 IER5LQ5T953 404 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF572Q7Z3I7 529 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ERLEC1Q96DZ1 483 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DDX47Q9H0S4 455 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 ZDHHC4Q9NPG8 344 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
PABPC1-219ENST00000522387 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
PABPC1-219ENST00000522387 SHROOM3Q8TF72 1996 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 KIF26AQ9ULI4 1882 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-219ENST00000522387 TYW5A2RUC4 315 aaKnown RBP12.69□□□□□ -0.38
PABPC1-219ENST00000522387 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 CYBBP04839 570 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 CYP17A1P05093 508 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 GLDCP23378 1020 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 ACVRL1P37023 503 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 MAGEA9P43362 315 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 HTR4Q13639 388 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 FYB2Q5VWT5 728 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 NLRP14Q86W24 1093 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
PABPC1-219ENST00000522387 OR7D4Q8NG98 312 aa12.69□□□□□ -0.38
PABPC1-219ENST00000522387 IFT81Q8WYA0 676 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 264.7 ms